RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 CFHR5Q9BXR6 569 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 MAF1Q9H063 256 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 PORCNQ9H237 461 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 MROH8Q9H579 483 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 ACAD9Q9H845 621 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 EFCC1Q9HA90 598 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 MAP3K20Q9NYL2 800 aaKnown RBP14.32□□□□□ -0.12
TMEM53-206ENST00000420706 FBXO40Q9UH90 709 aa14.32□□□□□ -0.12
TMEM53-206ENST00000420706 THSD7BQ9C0I4 1608 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 F13A1P00488 732 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 HSD17B4P51659 736 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 RESTQ13127 1097 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 UBE2SQ16763 222 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 JAKMIP3Q5VZ66 844 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.31□□□□□ -0.12
TMEM53-206ENST00000420706 FERMT3Q86UX7 667 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 RASGRP4Q8TDF6 673 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 ZSCAN16Q9H4T2 348 aaPredicted RBP14.31□□□□□ -0.12
TMEM53-206ENST00000420706 TMEM260Q9NX78 707 aa14.31□□□□□ -0.12
TMEM53-206ENST00000420706 TRPA1O75762 1119 aa14.3□□□□□ -0.12
TMEM53-206ENST00000420706 TBC1D8O95759 1140 aa14.3□□□□□ -0.12
TMEM53-206ENST00000420706 HOXA13P31271 388 aaPredicted RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 RPS6P62753 249 aaKnown RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 GNL2Q13823 731 aaKnown RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 BAATQ14032 418 aaPredicted RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 NOM1Q5C9Z4 860 aaKnown RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 EARS2Q5JPH6 523 aaKnown RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 NSMFQ6X4W1 530 aa14.3□□□□□ -0.12
TMEM53-206ENST00000420706 RNF207Q6ZRF8 634 aa14.3□□□□□ -0.12
TMEM53-206ENST00000420706 REXO1Q8N1G1 1221 aaKnown RBP14.3□□□□□ -0.12
TMEM53-206ENST00000420706 FOSP01100 380 aaPredicted RBP14.29□□□□□ -0.12
TMEM53-206ENST00000420706 AP3B2Q13367 1082 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 KRT25Q7Z3Z0 450 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 NOSTRINQ8IVI9 506 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 SYTL5Q8TDW5 730 aaPredicted RBP14.29□□□□□ -0.12
TMEM53-206ENST00000420706 A1CFQ9NQ94 594 aaKnown RBP14.29□□□□□ -0.12
TMEM53-206ENST00000420706 CYP39A1Q9NYL5 469 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 COL20A1Q9P218 1284 aa14.29□□□□□ -0.12
TMEM53-206ENST00000420706 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 FAM205CA6NFA0 338 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 MAPK4P31152 587 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 WDR78Q5VTH9 848 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 SLC30A10Q6XR72 485 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 PIK3AP1Q6ZUJ8 805 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 BRAPQ7Z569 592 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 GPR142Q7Z601 462 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 FCHSD1Q86WN1 690 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 CCAR1Q8IX12 1150 aaKnown RBP14.28□□□□□ -0.12
TMEM53-206ENST00000420706 ANKRD35Q8N283 1001 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 JMYQ8N9B5 988 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 PGBD1Q96JS3 809 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 TAAR1Q96RJ0 339 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 MMP19Q99542 508 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 ANO3Q9BYT9 981 aa14.28□□□□□ -0.12
TMEM53-206ENST00000420706 ZNFX1Q9P2E3 1918 aaKnown RBP14.27□□□□□ -0.12
TMEM53-206ENST00000420706 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 STRNO43815 780 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 FCER1AP12319 257 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 PTPREP23469 700 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 MAP2K1Q02750 393 aaPredicted RBP14.27□□□□□ -0.13
TMEM53-206ENST00000420706 KCTD2Q14681 263 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 NONOQ15233 471 aaKnown RBP eCLIP14.27□□□□□ -0.13
TMEM53-206ENST00000420706 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 FAM173BQ6P4H8 233 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 PURBQ96QR8 312 aaKnown RBP14.27□□□□□ -0.13
TMEM53-206ENST00000420706 BEGAINQ9BUH8 593 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 SAGE1Q9NXZ1 904 aa14.27□□□□□ -0.13
TMEM53-206ENST00000420706 PFASO15067 1338 aa14.26□□□□□ -0.13
TMEM53-206ENST00000420706 EDIL3O43854 480 aa14.26□□□□□ -0.13
TMEM53-206ENST00000420706 TOB1P50616 345 aaPredicted RBP14.26□□□□□ -0.13
TMEM53-206ENST00000420706 INF2Q27J81 1249 aa14.26□□□□□ -0.13
TMEM53-206ENST00000420706 ABRAQ8N0Z2 381 aa14.26□□□□□ -0.13
TMEM53-206ENST00000420706 TBCKQ8TEA7 893 aa14.26□□□□□ -0.13
TMEM53-206ENST00000420706 RBBP6Q7Z6E9 1792 aaKnown RBP14.26□□□□□ -0.13
TMEM53-206ENST00000420706 RPTORQ8N122 1335 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 DNAJC25-GNG10A0A024R161 153 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 SLC15A5A6NIM6 579 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 POTEB2H3BUK9 544 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 GPR25O00155 361 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 ECM2O94769 699 aaPredicted RBP14.25□□□□□ -0.13
TMEM53-206ENST00000420706 HSPA1AP0DMV8 641 aaKnown RBP14.25□□□□□ -0.13
TMEM53-206ENST00000420706 HSPA1BP0DMV9 641 aaKnown RBP14.25□□□□□ -0.13
TMEM53-206ENST00000420706 CTGFP29279 349 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 CNTN2Q02246 1040 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 SP3Q02447 781 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 RILPL1Q5EBL4 403 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 CRYGNQ8WXF5 182 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 TNPO1Q92973 898 aaKnown RBP14.25□□□□□ -0.13
TMEM53-206ENST00000420706 ATP6V1DQ9Y5K8 247 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 IVNS1ABPQ9Y6Y0 642 aa14.25□□□□□ -0.13
TMEM53-206ENST00000420706 SOWAHBA6NEL2 793 aa14.24□□□□□ -0.13
TMEM53-206ENST00000420706 COBLO75128 1261 aa14.24□□□□□ -0.13
TMEM53-206ENST00000420706 PGK2P07205 417 aa14.24□□□□□ -0.13
TMEM53-206ENST00000420706 CYP3A4P08684 503 aa14.24□□□□□ -0.13
TMEM53-206ENST00000420706 ATP2B1P20020 1258 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms