RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 MORC2Q9Y6X9 1032 aaPredicted RBP9.91□□□□□ -0.82
SNCA-206ENST00000420646 SMCHD1A6NHR9 2005 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 ASIC1P78348 528 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 RBL2Q08999 1139 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 PAK1Q13153 545 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 DGKZQ13574 1117 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 KRT31Q15323 416 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 NBPF9Q3BBW0 867 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 ZNF658Q5TYW1 1059 aaPredicted RBP9.9□□□□□ -0.82
SNCA-206ENST00000420646 CDKAL1Q5VV42 579 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 TATDN1Q6P1N9 297 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 SYT10Q6XYQ8 523 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 TOGARAM2Q6ZUX3 1019 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 NYAP1Q6ZVC0 841 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 GPIHBP1Q8IV16 184 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 CCDC150Q8NCX0 1101 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 TBC1D5Q92609 795 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 MTMR9Q96QG7 549 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 DHX36Q9H2U1 1008 aaKnown RBP9.9□□□□□ -0.82
SNCA-206ENST00000420646 SLC39A2Q9NP94 309 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 ADD3Q9UEY8 706 aaKnown RBP9.9□□□□□ -0.82
SNCA-206ENST00000420646 A0A1B0GTH6 734 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 FANCGO15287 622 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 MARCH6O60337 910 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 STAT3P40763 770 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.82
SNCA-206ENST00000420646 IRF2BP1Q8IU81 584 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 TMEM139Q8IV31 216 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 ZNF710Q8N1W2 664 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 CYP2W1Q8TAV3 490 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 HAS1Q92839 578 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 CCSER1Q9C0I3 900 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 EHD4Q9H223 541 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.82
SNCA-206ENST00000420646 RIC8AQ9NPQ8 531 aa9.9□□□□□ -0.82
SNCA-206ENST00000420646 NT5C2P49902 561 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 CACNB1Q02641 598 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 TBX2Q13207 712 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 GRB10Q13322 594 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 GPATCH4Q5T3I0 446 aaKnown RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 CUL5Q93034 780 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 PRIMPOLQ96LW4 560 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 CCDC17Q96LX7 622 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 PNMA5Q96PV4 448 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 TRIM9Q9C026 710 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 DDX25Q9UHL0 483 aaKnown RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 FOCADQ5VW36 1801 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 A0A0U1RQG5 324 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 SOWAHDA6NJG2 315 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 N4BP3O15049 544 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 SSBP05455 408 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNCA-206ENST00000420646 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 SMARCA1P28370 1054 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 CASP14P31944 242 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 FXR1P51114 621 aaKnown RBP eCLIP9.89□□□□□ -0.83
SNCA-206ENST00000420646 UBXN2AP68543 259 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 PDE4DQ08499 809 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 DLGAP5Q15398 846 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 CC2D2BQ6DHV5 1058 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 RSBN1LQ6PCB5 846 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 LRRN4CLQ8ND94 238 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 SRRTQ9BXP5 876 aaKnown RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 IRX2Q9BZI1 471 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 BLOC1S4Q9NUP1 217 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 MYH8P13535 1937 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 IDEP14735 1019 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 PRPHP41219 470 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 LRRC41Q15345 812 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 BAG1Q99933 345 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 TBC1D7Q9P0N9 293 aa9.89□□□□□ -0.83
SNCA-206ENST00000420646 ZNF70Q9UC06 446 aaPredicted RBP9.89□□□□□ -0.83
SNCA-206ENST00000420646 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 MYMKA6NI61 221 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 KCNJ18B7U540 433 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 MEIS2O14770 477 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 CLK2P49760 499 aaKnown RBP9.88□□□□□ -0.83
SNCA-206ENST00000420646 MRPL12P52815 198 aaKnown RBP9.88□□□□□ -0.83
SNCA-206ENST00000420646 TERF1P54274 439 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 KCNJ12Q14500 433 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 TMEM179Q6ZVK1 233 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 FCHSD1Q86WN1 690 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 OGFOD1Q8N543 542 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 SIPA1L1O43166 1804 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 TNS1Q9HBL0 1735 aaKnown RBP9.88□□□□□ -0.83
SNCA-206ENST00000420646 ASTN2O75129 1339 aaPredicted RBP9.88□□□□□ -0.83
SNCA-206ENST00000420646 NPHP3-ACAD11A0A0J9YXS1 232 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 CCDC93Q567U6 631 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 TCP11X2Q5H9J9 407 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 CCDC174Q6PII3 467 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 MKL1Q969V6 931 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 FBXO28Q9NVF7 368 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 NYAP2Q9P242 653 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 RWDD2AQ9UIY3 292 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 MYH4Q9Y623 1939 aa9.88□□□□□ -0.83
SNCA-206ENST00000420646 LAD1O00515 517 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms