RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 AKNAD1Q5T1N1 836 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 DEFB128Q7Z7B8 93 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 CHURC1Q8WUH1 139 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 COPS5Q92905 334 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 ASB2Q96Q27 587 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 NACAP1Q9BZK3 213 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
LINC00339-203ENST00000420503 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 MSRAQ9UJ68 235 aa15.26■□□□□ 0.03
LINC00339-203ENST00000420503 SCN10AQ9Y5Y9 1956 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 SALL3Q9BXA9 1300 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 ZBBXA8MT70 800 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 RANBP6O60518 1105 aaKnown RBP15.25■□□□□ 0.03
LINC00339-203ENST00000420503 ALDH5A1P51649 535 aaPredicted RBP15.25■□□□□ 0.03
LINC00339-203ENST00000420503 RAB30Q15771 203 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 MORC4Q8TE76 937 aa15.25■□□□□ 0.03
LINC00339-203ENST00000420503 RANBP17Q9H2T7 1088 aaKnown RBP15.25■□□□□ 0.03
LINC00339-203ENST00000420503 CHMP4BQ9H444 224 aaKnown RBP15.25■□□□□ 0.03
LINC00339-203ENST00000420503 TTC41PQ6P2S7 1318 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 PTPRSQ13332 1948 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 PLA2G6O60733 806 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 ICAM1P05362 532 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 MYL3P08590 195 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 PPP2R2DQ66LE6 453 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 IQSEC1Q6DN90 963 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 CLEC4DQ8WXI8 215 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 CPVLQ9H3G5 476 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 SLC28A3Q9HAS3 691 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 BRWD1Q9NSI6 2320 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 BDP1A6H8Y1 2624 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 XIRP2A4UGR9 3374 aa15.24■□□□□ 0.03
LINC00339-203ENST00000420503 TNKSO95271 1327 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 A0A0D9SFI3 127 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 CABYRO75952 493 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 SLC3A2P08195 630 aaKnown RBP15.23■□□□□ 0.03
LINC00339-203ENST00000420503 FDX1P10109 184 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 MX1P20591 662 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 CALML3P27482 149 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 NOVP48745 357 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 KCNQ1P51787 676 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 PURAQ00577 322 aaKnown RBP15.23■□□□□ 0.03
LINC00339-203ENST00000420503 DUSP28Q4G0W2 176 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 RRP12Q5JTH9 1297 aaKnown RBP15.23■□□□□ 0.03
LINC00339-203ENST00000420503 SYDE2Q5VT97 1194 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 ATXN2LQ8WWM7 1075 aaKnown RBP15.23■□□□□ 0.03
LINC00339-203ENST00000420503 FAM227BQ96M60 508 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 WDR11Q9BZH6 1224 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 VTA1Q9NP79 307 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 TRIP12Q14669 1992 aaPredicted RBP15.23■□□□□ 0.03
LINC00339-203ENST00000420503 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
LINC00339-203ENST00000420503 ARIH2O95376 493 aa15.22■□□□□ 0.03
LINC00339-203ENST00000420503 CA3P07451 260 aa15.22■□□□□ 0.03
LINC00339-203ENST00000420503 ATP2A2P16615 1042 aaKnown RBP15.22■□□□□ 0.03
LINC00339-203ENST00000420503 HAND2P61296 217 aa15.22■□□□□ 0.03
LINC00339-203ENST00000420503 TMCO2Q7Z6W1 182 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-203ENST00000420503 UHRF1Q96T88 793 aaPredicted RBP15.22■□□□□ 0.03
LINC00339-203ENST00000420503 ZEB2O60315 1214 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 MRPS5P82675 430 aaKnown RBP15.21■□□□□ 0.03
LINC00339-203ENST00000420503 NBPF20Q3BBV1 942 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
LINC00339-203ENST00000420503 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 TOMM22Q9NS69 142 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 ANAPC4Q9UJX5 808 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 Q9Y3F1 56 aa15.21■□□□□ 0.03
LINC00339-203ENST00000420503 ERC2O15083 957 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 ORC4O43929 436 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 FGRP09769 529 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 PDHBP11177 359 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 CHMP4BP1P59074 171 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 TCTN1Q2MV58 587 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 BTNL9Q6UXG8 535 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 TBC1D10CQ8IV04 446 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 TBC1D5Q92609 795 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 CTAGE1Q96RT6 745 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 MTIF3Q9H2K0 278 aaKnown RBP15.2■□□□□ 0.02
LINC00339-203ENST00000420503 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
LINC00339-203ENST00000420503 COL4A4P53420 1690 aaPredicted RBP15.19■□□□□ 0.02
LINC00339-203ENST00000420503 TRANK1O15050 2925 aa15.19■□□□□ 0.02
LINC00339-203ENST00000420503 RBM47A0AV96 593 aaKnown RBP15.19■□□□□ 0.02
LINC00339-203ENST00000420503 FGAP02671 866 aa15.19■□□□□ 0.02
LINC00339-203ENST00000420503 BMP1P13497 986 aa15.19■□□□□ 0.02
LINC00339-203ENST00000420503 RPS6P62753 249 aaKnown RBP15.19■□□□□ 0.02
LINC00339-203ENST00000420503 GPNMBQ14956 572 aa15.19■□□□□ 0.02
LINC00339-203ENST00000420503 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
LINC00339-203ENST00000420503 EDNRBP24530 442 aa15.18■□□□□ 0.02
LINC00339-203ENST00000420503 LRRFIP1Q32MZ4 808 aaKnown RBP15.18■□□□□ 0.02
LINC00339-203ENST00000420503 USH1GQ495M9 461 aa15.18■□□□□ 0.02
LINC00339-203ENST00000420503 RNF207Q6ZRF8 634 aa15.18■□□□□ 0.02
LINC00339-203ENST00000420503 RPUSD2Q8IZ73 545 aaKnown RBP15.18■□□□□ 0.02
LINC00339-203ENST00000420503 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
LINC00339-203ENST00000420503 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
LINC00339-203ENST00000420503 COL20A1Q9P218 1284 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms