RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ANKS1AQ92625 1134 aa23.88■■□□□ 1.41
MCF2L-212ENST00000420013 KAT14Q9H8E8 782 aa23.88■■□□□ 1.41
MCF2L-212ENST00000420013 DUSP28Q4G0W2 176 aa23.87■■□□□ 1.41
MCF2L-212ENST00000420013 RNF207Q6ZRF8 634 aa23.87■■□□□ 1.41
MCF2L-212ENST00000420013 EEPD1Q7L9B9 569 aa23.87■■□□□ 1.41
MCF2L-212ENST00000420013 GUCD1Q96NT3 240 aa23.87■■□□□ 1.41
MCF2L-212ENST00000420013 KRT23Q9C075 422 aa23.87■■□□□ 1.41
MCF2L-212ENST00000420013 SCN10AQ9Y5Y9 1956 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 RBM47A0AV96 593 aaKnown RBP23.86■■□□□ 1.41
MCF2L-212ENST00000420013 B4DLN1 442 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 B4E1Z4 1266 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 CD4P01730 458 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 MRPL12P52815 198 aaKnown RBP23.86■■□□□ 1.41
MCF2L-212ENST00000420013 EPHB4P54760 987 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 CXCL17Q6UXB2 119 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 KIAA1211Q6ZU35 1233 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 ZSCAN10Q96SZ4 725 aaPredicted RBP23.86■■□□□ 1.41
MCF2L-212ENST00000420013 ZKSCAN3Q9BRR0 538 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 PDGFCQ9NRA1 345 aa23.86■■□□□ 1.41
MCF2L-212ENST00000420013 SUPT16HQ9Y5B9 1047 aaKnown RBP23.86■■□□□ 1.41
MCF2L-212ENST00000420013 TNKSO95271 1327 aa23.85■■□□□ 1.41
MCF2L-212ENST00000420013 KIAA1217Q5T5P2 1943 aa23.85■■□□□ 1.41
MCF2L-212ENST00000420013 NKRFO15226 690 aaKnown RBP eCLIP23.85■■□□□ 1.41
MCF2L-212ENST00000420013 DYNC1LI2O43237 492 aaPredicted RBP23.85■■□□□ 1.41
MCF2L-212ENST00000420013 EDNRBP24530 442 aa23.85■■□□□ 1.41
MCF2L-212ENST00000420013 RPS6P62753 249 aaKnown RBP23.85■■□□□ 1.41
MCF2L-212ENST00000420013 PSRC1Q6PGN9 363 aaPredicted RBP23.85■■□□□ 1.41
MCF2L-212ENST00000420013 TMEM199Q8N511 208 aa23.85■■□□□ 1.41
MCF2L-212ENST00000420013 ENAHQ8N8S7 591 aaPredicted RBP23.85■■□□□ 1.41
MCF2L-212ENST00000420013 RGS22Q8NE09 1264 aa23.85■■□□□ 1.41
MCF2L-212ENST00000420013 ABCB11O95342 1321 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 CALML3P27482 149 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 CPT1AP50416 773 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 ITGA7Q13683 1181 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 PURBQ96QR8 312 aaKnown RBP23.84■■□□□ 1.41
MCF2L-212ENST00000420013 UBAC1Q9BSL1 405 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 POLR3EQ9NVU0 708 aa23.84■■□□□ 1.41
MCF2L-212ENST00000420013 DDX49Q9Y6V7 483 aaKnown RBP23.84■■□□□ 1.41
MCF2L-212ENST00000420013 PDE4DQ08499 809 aa23.83■■□□□ 1.41
MCF2L-212ENST00000420013 CDC37Q16543 378 aaPredicted RBP23.83■■□□□ 1.41
MCF2L-212ENST00000420013 TTC22Q5TAA0 569 aa23.83■■□□□ 1.41
MCF2L-212ENST00000420013 WDR11Q9BZH6 1224 aa23.83■■□□□ 1.41
MCF2L-212ENST00000420013 TANC1Q9C0D5 1861 aa23.83■■□□□ 1.4
MCF2L-212ENST00000420013 GOLGA8HP0CJ92 632 aa23.82■■□□□ 1.4
MCF2L-212ENST00000420013 PPP2R5BQ15173 497 aa23.82■■□□□ 1.4
MCF2L-212ENST00000420013 USH1GQ495M9 461 aa23.82■■□□□ 1.4
MCF2L-212ENST00000420013 BRDTQ58F21 947 aaPredicted RBP23.82■■□□□ 1.4
MCF2L-212ENST00000420013 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
MCF2L-212ENST00000420013 ZSWIM5Q9P217 1185 aa23.82■■□□□ 1.4
MCF2L-212ENST00000420013 GSPT1P15170 499 aaKnown RBP23.81■■□□□ 1.4
MCF2L-212ENST00000420013 RUFY2Q8WXA3 655 aa23.81■■□□□ 1.4
MCF2L-212ENST00000420013 FAM161BQ96MY7 647 aa23.81■■□□□ 1.4
MCF2L-212ENST00000420013 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.81■■□□□ 1.42e-7■□□□□ 9.1
MCF2L-212ENST00000420013 PPP1R12CQ9BZL4 782 aa23.81■■□□□ 1.4
MCF2L-212ENST00000420013 HIPK3Q9H422 1215 aa23.81■■□□□ 1.4
MCF2L-212ENST00000420013 CDH23Q9H251 3354 aa23.81■■□□□ 1.4
MCF2L-212ENST00000420013 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.8■■□□□ 1.4
MCF2L-212ENST00000420013 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.8■■□□□ 1.4
MCF2L-212ENST00000420013 PARP1P09874 1014 aaKnown RBP23.8■■□□□ 1.4
MCF2L-212ENST00000420013 PDE4AP27815 886 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 IFIT1BQ5T764 474 aaKnown RBP23.8■■□□□ 1.4
MCF2L-212ENST00000420013 ADGRF4Q8IZF3 695 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 OR6J1Q8NGC5 347 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 UBA5Q9GZZ9 404 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 MTIF3Q9H2K0 278 aaKnown RBP23.8■■□□□ 1.4
MCF2L-212ENST00000420013 SEMA6BQ9H3T3 888 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 GRIN2DO15399 1336 aa23.8■■□□□ 1.4
MCF2L-212ENST00000420013 CSF2RAP15509 400 aa23.79■■□□□ 1.4
MCF2L-212ENST00000420013 TMEM240Q5SV17 173 aa23.79■■□□□ 1.4
MCF2L-212ENST00000420013 RASIP1Q5U651 963 aa23.79■■□□□ 1.4
MCF2L-212ENST00000420013 MCF2L2Q86YR7 1114 aa23.79■■□□□ 1.4
MCF2L-212ENST00000420013 TTYH1Q9H313 450 aaPredicted RBP23.79■■□□□ 1.4
MCF2L-212ENST00000420013 UNC80Q8N2C7 3258 aa23.79■■□□□ 1.4
MCF2L-212ENST00000420013 PTGS1P23219 599 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 DNAJB2P25686 324 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 PURAQ00577 322 aaKnown RBP23.78■■□□□ 1.4
MCF2L-212ENST00000420013 TRDNQ13061 729 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 TMEM63BQ5T3F8 832 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 CDX2Q99626 313 aaPredicted RBP23.78■■□□□ 1.4
MCF2L-212ENST00000420013 IL25Q9H293 177 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 CPVLQ9H3G5 476 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 IL23AQ9NPF7 189 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 MRPL11Q9Y3B7 192 aaKnown RBP23.78■■□□□ 1.4
MCF2L-212ENST00000420013 CUL9Q8IWT3 2517 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 A0A0C4DFX4 3053 aa23.78■■□□□ 1.4
MCF2L-212ENST00000420013 GBF1Q92538 1859 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 B4GALT4O60513 344 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 KPNA6O60684 536 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 TTLL4Q14679 1199 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 QRICH1Q2TAL8 776 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 FBXO11Q86XK2 927 aa23.77■■□□□ 1.4
MCF2L-212ENST00000420013 MTG1Q9BT17 334 aaPredicted RBP23.77■■□□□ 1.4
MCF2L-212ENST00000420013 NOC4LQ9BVI4 516 aaKnown RBP23.77■■□□□ 1.4
MCF2L-212ENST00000420013 ALDH8A1Q9H2A2 487 aaPredicted RBP23.77■■□□□ 1.4
MCF2L-212ENST00000420013 GPHNQ9NQX3 736 aaPredicted RBP23.77■■□□□ 1.4
MCF2L-212ENST00000420013 DHX16O60231 1041 aaKnown RBP23.76■■□□□ 1.39
MCF2L-212ENST00000420013 SUPT20HL2P0C7V6 817 aa23.76■■□□□ 1.39
MCF2L-212ENST00000420013 CYP2C18P33260 490 aa23.76■■□□□ 1.39
MCF2L-212ENST00000420013 SEC23AQ15436 765 aa23.76■■□□□ 1.39
MCF2L-212ENST00000420013 U3KPZ7 1027 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms