RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 PUS3Q9BZE2 481 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 ZNF576Q9H609 170 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 GNL3LQ9NVN8 582 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 TTF2Q9UNY4 1162 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 BTAF1O14981 1849 aa8.54□□□□□ -1.04
EPHA4-205ENST00000419964 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
EPHA4-205ENST00000419964 H3BRJ5 948 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 SCAMP3O14828 347 aaKnown RBP8.53□□□□□ -1.04
EPHA4-205ENST00000419964 PTH1RQ03431 593 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 UBE3CQ15386 1083 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 ADAMTSL4Q6UY14 1074 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 DDX46Q7L014 1031 aaKnown RBP8.53□□□□□ -1.04
EPHA4-205ENST00000419964 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 ANKRD18AQ8IVF6 992 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 VGLL2Q8N8G2 317 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 APPBP2Q92624 585 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 UPF3BQ9BZI7 483 aaKnown RBP8.53□□□□□ -1.04
EPHA4-205ENST00000419964 CEP44Q9C0F1 390 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 IL25Q9H293 177 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 KIF3AQ9Y496 699 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 ARAP2Q8WZ64 1704 aa8.53□□□□□ -1.04
EPHA4-205ENST00000419964 KAT6BQ8WYB5 2073 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 LY75O60449 1722 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 CARMIL3Q8ND23 1372 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-205ENST00000419964 NID1P14543 1247 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 HOXB4P17483 251 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-205ENST00000419964 EPHA1P21709 976 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 FGFR2P21802 821 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 RPS6KB1P23443 525 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 HSPA1LP34931 641 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 RFC4P35249 363 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 BAG6P46379 1132 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 AK2P54819 239 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 MAP3K12Q12852 859 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 UBE4AQ14139 1066 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 IKBKEQ14164 716 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 IMMTQ16891 758 aaKnown RBP8.52□□□□□ -1.05
EPHA4-205ENST00000419964 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 MEI1Q5TIA1 1274 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF772Q68DY9 489 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-205ENST00000419964 NEK1Q96PY6 1258 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 ANKRD2Q9GZV1 360 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 BSDC1Q9NW68 430 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-205ENST00000419964 SMC3Q9UQE7 1217 aa8.52□□□□□ -1.05
EPHA4-205ENST00000419964 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 GNAT2P19087 354 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 DEKP35659 375 aaKnown RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 PPP2R3AQ06190 1150 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 CAVIN4Q5BKX8 364 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 LDLRAD1Q5T700 205 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 L1TD1Q5T7N2 865 aaKnown RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 PODNQ7Z5L7 613 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 NBPF5PQ86XG9 351 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 DMRTC2Q8IXT2 367 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 FBXL16Q8N461 479 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 WNT8BQ93098 351 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 SRA1Q9HD15 236 aaKnown RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 METTL5Q9NRN9 209 aaKnown RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 MKL2Q9ULH7 1088 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 DDX60Q8IY21 1712 aaKnown RBP8.51□□□□□ -1.05
EPHA4-205ENST00000419964 ZMYM6O95789 1325 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
EPHA4-205ENST00000419964 SPDYE3A6NKU9 549 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 LINC01387J3KSC0 135 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 GNB5O14775 395 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 NPHP1O15259 732 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 BAG4O95429 457 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 MBD3O95983 291 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 B3GALT4O96024 378 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 C4BP0C0L5 1744 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 HSPD1P10809 573 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 ESRRAP11474 423 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 NCLP19338 710 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 CDC25BP30305 580 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 ARL4DP49703 201 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 COL9A3Q14050 684 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 COL24A1Q17RW2 1714 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 KRT27Q7Z3Y8 459 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF589Q86UQ0 364 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 LLPHQ9BRT6 129 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 SEC31BQ9NQW1 1179 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 GPN3Q9UHW5 284 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 MAST3O60307 1309 aa8.5□□□□□ -1.05
EPHA4-205ENST00000419964 PDS5AQ29RF7 1337 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 MYH14Q7Z406 1995 aaKnown RBP8.5□□□□□ -1.05
EPHA4-205ENST00000419964 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 TCF3P15923 654 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 LORP23490 312 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-205ENST00000419964 ADORA1P30542 326 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 ADD2P35612 726 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 ZNF76P36508 570 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 MCAMP43121 646 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 NT5C2P49902 561 aa8.49□□□□□ -1.05
EPHA4-205ENST00000419964 SNRPNP63162 240 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms