RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 SKIV2LQ15477 1246 aaKnown RBP16.3■□□□□ 0.2
NOD1-205ENST00000419799 AGBL1Q96MI9 1066 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 LRFN3Q9BTN0 628 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 AP5M1Q9H0R1 490 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 TRPV6Q9H1D0 765 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 TOMM22Q9NS69 142 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 COG5Q9UP83 839 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 MTCH2Q9Y6C9 303 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 MYO9BQ13459 2157 aa16.3■□□□□ 0.2
NOD1-205ENST00000419799 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 TCF20Q9UGU0 1960 aaKnown RBP16.29■□□□□ 0.2
NOD1-205ENST00000419799 ZBBXA8MT70 800 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
NOD1-205ENST00000419799 FGAP02671 866 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 TMEM67Q5HYA8 995 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 RRP12Q5JTH9 1297 aaKnown RBP16.29■□□□□ 0.2
NOD1-205ENST00000419799 POTEHQ6S545 545 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 LRRC47Q8N1G4 583 aaKnown RBP16.29■□□□□ 0.2
NOD1-205ENST00000419799 GMCL1P1Q8NEA9 526 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 CEP95Q96GE4 821 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 EPHX3Q9H6B9 360 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 ACAD9Q9H845 621 aa16.29■□□□□ 0.2
NOD1-205ENST00000419799 SOWAHBA6NEL2 793 aa16.28■□□□□ 0.2
NOD1-205ENST00000419799 DYNC1LI2O43237 492 aaPredicted RBP16.28■□□□□ 0.2
NOD1-205ENST00000419799 RANBP6O60518 1105 aaKnown RBP16.28■□□□□ 0.2
NOD1-205ENST00000419799 SMPD1P17405 629 aa16.28■□□□□ 0.2
NOD1-205ENST00000419799 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
NOD1-205ENST00000419799 SCLYQ96I15 445 aa16.28■□□□□ 0.2
NOD1-205ENST00000419799 A1CFQ9NQ94 594 aaKnown RBP16.28■□□□□ 0.2
NOD1-205ENST00000419799 HOMER2Q9NSB8 354 aa16.28■□□□□ 0.2
NOD1-205ENST00000419799 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
NOD1-205ENST00000419799 XIRP2A4UGR9 3374 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 TSPY2A6NKD2 308 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 HIP1O00291 1037 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 TLL1O43897 1013 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 CA3P07451 260 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 SUPT20HL2P0C7V6 817 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 MFAP1P55081 439 aaKnown RBP16.27■□□□□ 0.2
NOD1-205ENST00000419799 TTLL4Q14679 1199 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 ALX1Q15699 326 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 TKFCQ3LXA3 575 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 TMEM31Q5JXX7 168 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 NEDD1Q8NHV4 660 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 ALDH8A1Q9H2A2 487 aaPredicted RBP16.27■□□□□ 0.2
NOD1-205ENST00000419799 MTMR4Q9NYA4 1195 aa16.27■□□□□ 0.2
NOD1-205ENST00000419799 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.27■□□□□ 0.2
NOD1-205ENST00000419799 ZNF536O15090 1300 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 LRRC37A2A6NM11 1700 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 RFXAPO00287 272 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 NMT2O60551 498 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 TTLL1O95922 423 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 BMP3P12645 472 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 PSMC6P62333 389 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 TAPT1Q6NXT6 567 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 TICAM2Q86XR7 235 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 PHOSPHO2Q8TCD6 241 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 SLC9A7Q96T83 725 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 RNF146Q9NTX7 359 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 MTMR7Q9Y216 660 aa16.26■□□□□ 0.19
NOD1-205ENST00000419799 REV3LO60673 3130 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 GPR37L1O60883 481 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 ACTN1P12814 892 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 STAT2P52630 851 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 SLFN13Q68D06 897 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 HLA-CQ95604 372 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 IL25Q9H293 177 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 STX8Q9UNK0 236 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 MYH4Q9Y623 1939 aa16.25■□□□□ 0.19
NOD1-205ENST00000419799 NCOR1O75376 2440 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 EPOPA6NHQ4 379 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 TMEM232C9JQI7 657 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 PTGS1P23219 599 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 RFC2P35250 354 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 FAM160B2Q86V87 743 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 TBC1D10CQ8IV04 446 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 MORC4Q8TE76 937 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 CHURC1Q8WUH1 139 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 TRERF1Q96PN7 1200 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 VTA1Q9NP79 307 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 PLIN4Q96Q06 1357 aa16.24■□□□□ 0.19
NOD1-205ENST00000419799 TNKSO95271 1327 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 ZNF213O14771 459 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 PLA2G6O60733 806 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 CYP2C9P11712 490 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 TAP1Q03518 808 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 DUSP28Q4G0W2 176 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 DEFB128Q7Z7B8 93 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 FBXO16Q8IX29 292 aaPredicted RBP16.23■□□□□ 0.19
NOD1-205ENST00000419799 STAG1Q8WVM7 1258 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 CERS4Q9HA82 394 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 IL17RBQ9NRM6 502 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 TRMT13Q9NUP7 481 aaKnown RBP16.23■□□□□ 0.19
NOD1-205ENST00000419799 POLR3EQ9NVU0 708 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 CYP39A1Q9NYL5 469 aa16.23■□□□□ 0.19
NOD1-205ENST00000419799 BDP1A6H8Y1 2624 aa16.22■□□□□ 0.19
NOD1-205ENST00000419799 KIF28PB7ZC32 967 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms