RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CPXCR1Q8N123 301 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 FEM1BQ9UK73 627 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CCL15-CCL14A0A0B4J2E2 113 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 UNCXA6NJT0 531 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CCL15Q16663 113 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 KMT5BQ4FZB7 885 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 KRT40Q6A162 431 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CYP4F22Q6NT55 531 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 POTEEQ6S8J3 1075 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CATSPERGQ6ZRH7 1159 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CKAP2LQ8IYA6 745 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 PRPF38AQ8NAV1 312 aaKnown RBP14.61□□□□□ -0.07
LINC00642-201ENST00000419459 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
LINC00642-201ENST00000419459 FBXO18Q8NFZ0 1043 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 CHURC1Q8WUH1 139 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 BRI3BPQ8WY22 251 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 BBXQ8WY36 941 aaPredicted RBP14.61□□□□□ -0.07
LINC00642-201ENST00000419459 MTMR8Q96EF0 704 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 TIGD1Q96MW7 591 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 ZIC5Q96T25 663 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 PPP1R9AQ9ULJ8 1098 aa14.61□□□□□ -0.07
LINC00642-201ENST00000419459 SLU7O95391 586 aaKnown RBP14.6□□□□□ -0.07
LINC00642-201ENST00000419459 SMARCA1P28370 1054 aa14.6□□□□□ -0.07
LINC00642-201ENST00000419459 GSDMDP57764 484 aa14.6□□□□□ -0.07
LINC00642-201ENST00000419459 FAM173BQ6P4H8 233 aa14.6□□□□□ -0.07
LINC00642-201ENST00000419459 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
LINC00642-201ENST00000419459 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
LINC00642-201ENST00000419459 PNMA6FA0A0J9YX94 578 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 SPDYE16A6NNV3 312 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 STXBP3O00186 592 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 CYP2C8P10632 490 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 NAPAP54920 295 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 GPAT2Q6NUI2 795 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 FAM160B2Q86V87 743 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 AGBL1Q96MI9 1066 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 PTPN18Q99952 460 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 BARHL2Q9NY43 387 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 ZNF215Q9UL58 517 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 FAM155AB1AL88 458 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 KIF28PB7ZC32 967 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L15C9J2P7 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L13C9JLJ4 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L11C9JVI0 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L18D6R9N7 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L22D6RA61 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L17D6RBQ6 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L19D6RCP7 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L20D6RJB6 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 VWA5AO00534 786 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 KCNJ6P48051 423 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 GTF2A2P52657 109 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 USP17L24Q0WX57 530 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 NR5A1Q13285 461 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 TRIM29Q14134 588 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 COG2Q14746 738 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 IQCB1Q15051 598 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 NPY5RQ15761 445 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 STX1AQ16623 288 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 CCDC144BQ3MJ40 725 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 RASGRP4Q8TDF6 673 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 WASF1Q92558 559 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 TSPYL1Q9H0U9 437 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 ASCC2Q9H1I8 757 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 RANBP17Q9H2T7 1088 aaKnown RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 ZSCAN16Q9H4T2 348 aaPredicted RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 RAVER2Q9HCJ3 691 aaKnown RBP14.59□□□□□ -0.07
LINC00642-201ENST00000419459 HOMER2Q9NSB8 354 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 CFAP45Q9UL16 551 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 PCDHA1Q9Y5I3 950 aa14.59□□□□□ -0.07
LINC00642-201ENST00000419459 ZNF536O15090 1300 aa14.58□□□□□ -0.07
LINC00642-201ENST00000419459 BTBD19C9JJ37 291 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 IRX3P78415 501 aaPredicted RBP14.58□□□□□ -0.08
LINC00642-201ENST00000419459 BMS1Q14692 1282 aaKnown RBP14.58□□□□□ -0.08
LINC00642-201ENST00000419459 NOM1Q5C9Z4 860 aaKnown RBP14.58□□□□□ -0.08
LINC00642-201ENST00000419459 BICD2Q8TD16 824 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
LINC00642-201ENST00000419459 SLC38A10Q9HBR0 1119 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 BTBD18B2RXH4 712 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 PLA2G6O60733 806 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 MMP1P03956 469 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 CETPP11597 493 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 SKILP12757 684 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 DSG3P32926 999 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 NLRP5P59047 1200 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 FASTKD5Q7L8L6 764 aaKnown RBP14.58□□□□□ -0.08
LINC00642-201ENST00000419459 PHF20Q9BVI0 1012 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 IMPACTQ9P2X3 320 aa14.58□□□□□ -0.08
LINC00642-201ENST00000419459 PDHXO00330 501 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 NR1I2O75469 434 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 SLC10A3P09131 477 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 HOXA7P31268 230 aaPredicted RBP14.57□□□□□ -0.08
LINC00642-201ENST00000419459 APLP1P51693 650 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 PLS1Q14651 629 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 TMEM132BQ14DG7 1078 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 FBXO38Q6PIJ6 1188 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 FBXO11Q86XK2 927 aa14.57□□□□□ -0.08
LINC00642-201ENST00000419459 DIS3L2Q8IYB7 885 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms