RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 LOC102724159A0A0B4J2E5 919 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 NEMFO60524 1076 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 CCNT1O60563 726 aaKnown RBP11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZNF202O95125 648 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 TXLNAP40222 546 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 SYKP43405 635 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 HMGCS2P54868 508 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 SNAPC2Q13487 334 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 PWP2Q15269 919 aaKnown RBP11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 INF2Q27J81 1249 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 JAKMIP3Q5VZ66 844 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 CHADLQ6NUI6 762 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 SHC4Q6S5L8 630 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 NIPA1Q7RTP0 329 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 REPS2Q8NFH8 660 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 TEX13BQ9BXU2 312 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 GTPBP4Q9BZE4 634 aaKnown RBP11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 FTOQ9C0B1 505 aaKnown RBP eCLIP11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 CCSER1Q9C0I3 900 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 CUEDC2Q9H467 287 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 MAGEF1Q9HAY2 307 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZCCHC17Q9NP64 241 aaKnown RBP11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 KCNH3Q9ULD8 1083 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 CCPG1Q9ULG6 757 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 AGTPBP1Q9UPW5 1226 aa11.47□□□□□ -0.57
HMGA1P6-201ENST00000418454 OPLAHO14841 1288 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 MAFGO15525 162 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 NR1I2O75469 434 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 STAM2O75886 525 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 SLC25A27O95847 323 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 BCRP11274 1271 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 CETPP11597 493 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 LIG1P18858 919 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 OSBPP22059 807 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 MARCKSP29966 332 aaPredicted RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 MCM7P33993 719 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 GTF2A2P52657 109 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 TTLL12Q14166 644 aaPredicted RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 ZYXQ15942 572 aaKnown RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 TMEM266Q2M3C6 531 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 LETM2Q2VYF4 491 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 CT47A1Q5JQC4 288 aaPredicted RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 L1TD1Q5T7N2 865 aaKnown RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 ANO3Q9BYT9 981 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 TNMDQ9H2S6 317 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 GBA2Q9HCG7 927 aaPredicted RBP11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 FBXO28Q9NVF7 368 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 PNMA3Q9UL41 463 aa11.46□□□□□ -0.57
HMGA1P6-201ENST00000418454 TCHHQ07283 1943 aa11.46□□□□□ -0.58
HMGA1P6-201ENST00000418454 FRMPD4Q14CM0 1322 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 FSD2A1L4K1 749 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 ITGBL1O95965 494 aaPredicted RBP11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 PFKFB1P16118 471 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 MUTP22033 750 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 NDUFA8P51970 172 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 INHBEP58166 350 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 ARHGAP4P98171 946 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 IGSF22Q8N9C0 903 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 IQUBQ8NA54 791 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 CLEC4DQ8WXI8 215 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 OPTNQ96CV9 577 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 SDF4Q9BRK5 362 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 CSRNP2Q9H175 543 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 ELP3Q9H9T3 547 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 CCDC39Q9UFE4 941 aa11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 ZNF214Q9UL59 606 aaPredicted RBP11.45□□□□□ -0.58
HMGA1P6-201ENST00000418454 RPTORQ8N122 1335 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 A0A1B0GVL5 298 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 TESPA1A2RU30 521 aaPredicted RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 B4DLN1 442 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 SLFN14P0C7P3 912 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 CCDC192P0DO97 292 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 STAT3P40763 770 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 SETQ01105 290 aaPredicted RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 CALCRLQ16602 461 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 USH1GQ495M9 461 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 MAP1SQ66K74 1059 aaPredicted RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 CCDC174Q6PII3 467 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 USP17L6PQ6QN14 398 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 ANKRD23Q86SG2 305 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 RIOX2Q8IUF8 465 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 RASGRP4Q8TDF6 673 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 HHIPL1Q96JK4 782 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 TRERF1Q96PN7 1200 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 LRRC27Q9C0I9 530 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 KCNMB3Q9NPA1 279 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 DDX25Q9UHL0 483 aaKnown RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 POLR2AP24928 1970 aaKnown RBP11.44□□□□□ -0.58
HMGA1P6-201ENST00000418454 GOLGA6L3A6NEY3 463 aa11.43□□□□□ -0.58
HMGA1P6-201ENST00000418454 SPDYE16A6NNV3 312 aaPredicted RBP11.43□□□□□ -0.58
HMGA1P6-201ENST00000418454 ADAMTS3O15072 1205 aa11.43□□□□□ -0.58
HMGA1P6-201ENST00000418454 EDIL3O43854 480 aa11.43□□□□□ -0.58
HMGA1P6-201ENST00000418454 CFBP00751 764 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms