RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 EFCC1Q9HA90 598 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
TRIM48-201ENST00000417545 ZNF536O15090 1300 aa9.71□□□□□ -0.85
TRIM48-201ENST00000417545 ADGRA2Q96PE1 1338 aa9.71□□□□□ -0.85
TRIM48-201ENST00000417545 B4DLN1 442 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 POTEB2H3BUK9 544 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 PPP1R11O60927 126 aaPredicted RBP9.71□□□□□ -0.86
TRIM48-201ENST00000417545 HOXD10P28358 340 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 KRT2P35908 639 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 PSMC4P43686 418 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 PKN1Q16512 942 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 Q3C1V9 767 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 MUM1L1Q5H9M0 696 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 MCTP2Q6DN12 878 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 GALNT17Q6IS24 598 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 GPR142Q7Z601 462 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 DPP9Q86TI2 863 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 FAM177A1Q8N128 213 aaPredicted RBP9.71□□□□□ -0.86
TRIM48-201ENST00000417545 REXO1Q8N1G1 1221 aaKnown RBP9.71□□□□□ -0.86
TRIM48-201ENST00000417545 CFHR5Q9BXR6 569 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 PORCNQ9H237 461 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 KCNJ14Q9UNX9 436 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 RIPK3Q9Y572 518 aa9.71□□□□□ -0.86
TRIM48-201ENST00000417545 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 NFIBO00712 420 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 STRNO43815 780 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 HSPA1AP0DMV8 641 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 HSPA1BP0DMV9 641 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 PDIA4P13667 645 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 FDPSP14324 419 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 LACTBP83111 547 aaPredicted RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 UBE2SQ16763 222 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 KRT40Q6A162 431 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 FCHSD1Q86WN1 690 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 BLIDQ8IZY5 108 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 SAMD3Q8N6K7 520 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 DNAJC5GQ8N7S2 189 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 CD99L2Q8TCZ2 262 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 SOCS4Q8WXH5 440 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 IPO9Q96P70 1041 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 NUDT12Q9BQG2 462 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 RIC8AQ9NPQ8 531 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 WBP1LQ9NX94 342 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 ADD3Q9UEY8 706 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 PCDHA4Q9UN74 947 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 PLXNA1Q9UIW2 1896 aa9.7□□□□□ -0.86
TRIM48-201ENST00000417545 ZNFX1Q9P2E3 1918 aaKnown RBP9.7□□□□□ -0.86
TRIM48-201ENST00000417545 ESYT2A0FGR8 921 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 SLC15A5A6NIM6 579 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 MMP1P03956 469 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 PTPREP23469 700 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 HOXA13P31271 388 aaPredicted RBP9.69□□□□□ -0.86
TRIM48-201ENST00000417545 RGS2P41220 211 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 BAATQ14032 418 aaPredicted RBP9.69□□□□□ -0.86
TRIM48-201ENST00000417545 ARHGEF16Q5VV41 709 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 JAKMIP3Q5VZ66 844 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 SLC30A10Q6XR72 485 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 MAF1Q9H063 256 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 ZMYND12Q9H0C1 365 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 R3HDMLQ9H3Y0 253 aa9.69□□□□□ -0.86
TRIM48-201ENST00000417545 A1CFQ9NQ94 594 aaKnown RBP9.69□□□□□ -0.86
TRIM48-201ENST00000417545 MAP3K20Q9NYL2 800 aaKnown RBP9.69□□□□□ -0.86
TRIM48-201ENST00000417545 BIN2Q9UBW5 565 aaPredicted RBP9.69□□□□□ -0.86
TRIM48-201ENST00000417545 SMCHD1A6NHR9 2005 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 ZSWIM8A7E2V4 1837 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 ZNF236Q9UL36 1845 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 STX6O43752 255 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 FOSP01100 380 aaPredicted RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 ADORA2AP29274 412 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 CTCFP49711 727 aaPredicted RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 RPS6P62753 249 aaKnown RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 USP17L6PQ6QN14 398 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 KRT25Q7Z3Z0 450 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 TEX2Q8IWB9 1127 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 DIS3L2Q8IYB7 885 aaKnown RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 ABRAQ8N0Z2 381 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 RGS22Q8NE09 1264 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 RAET1EQ8TD07 263 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 ZNF296Q8WUU4 475 aaPredicted RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 CLEC4DQ8WXI8 215 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 PHF20Q9BVI0 1012 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 CYP39A1Q9NYL5 469 aa9.68□□□□□ -0.86
TRIM48-201ENST00000417545 NOL7Q9UMY1 257 aaKnown RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
TRIM48-201ENST00000417545 GNRH1P01148 92 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 PGK2P07205 417 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 SYT1P21579 422 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 ZNF76P36508 570 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 PDE4DQ08499 809 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 NONOQ15233 471 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRIM48-201ENST00000417545 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
TRIM48-201ENST00000417545 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
TRIM48-201ENST00000417545 TYW1BQ6NUM6 668 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 POTEEQ6S8J3 1075 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 JMYQ8N9B5 988 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 DAGLBQ8NCG7 672 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 RASGRP4Q8TDF6 673 aa9.67□□□□□ -0.86
TRIM48-201ENST00000417545 NSUN6Q8TEA1 469 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms