RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 PRKAG2Q9UGJ0 569 aa18.2■□□□□ 0.5
ITGB1-204ENST00000417122 A0A1W2PPC1 479 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 CDC45O75419 566 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 TROAPQ12815 778 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 IQSEC1Q6DN90 963 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 CATIPQ7Z7H3 387 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 PCSK9Q8NBP7 692 aaKnown RBP18.19■□□□□ 0.5
ITGB1-204ENST00000417122 DNERQ8NFT8 737 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 NUP133Q8WUM0 1156 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
ITGB1-204ENST00000417122 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 STARD7Q9NQZ5 370 aa18.19■□□□□ 0.5
ITGB1-204ENST00000417122 GNEQ9Y223 722 aaKnown RBP18.19■□□□□ 0.5
ITGB1-204ENST00000417122 MRPL11Q9Y3B7 192 aaKnown RBP18.19■□□□□ 0.5
ITGB1-204ENST00000417122 ZBTB5O15062 677 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 PRC1O43663 620 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 ASGR1P07306 291 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 SMPD1P17405 629 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 MCM5P33992 734 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 NKX3-2P78367 333 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 GNASQ5JWF2 1037 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 TLK2Q86UE8 772 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 MCF2L2Q86YR7 1114 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 TBC1D5Q92609 795 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 MTMR8Q96EF0 704 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 AMNQ9BXJ7 453 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 LY9Q9HBG7 655 aa18.18■□□□□ 0.5
ITGB1-204ENST00000417122 B4DLN1 442 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 CTAGE5O15320 804 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 MRPL12P52815 198 aaKnown RBP18.17■□□□□ 0.5
ITGB1-204ENST00000417122 MDM2Q00987 491 aaPredicted RBP18.17■□□□□ 0.5
ITGB1-204ENST00000417122 PDE4DQ08499 809 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 RNF20Q5VTR2 975 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 TMEM87BQ96K49 555 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 GLT1D1Q96MS3 346 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 AP5M1Q9H0R1 490 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 RIOX1Q9H6W3 641 aa18.17■□□□□ 0.5
ITGB1-204ENST00000417122 PRDM5Q9NQX1 630 aaPredicted RBP18.17■□□□□ 0.5
ITGB1-204ENST00000417122 EDNRBP24530 442 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 BEX3Q00994 111 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 TLE2Q04725 743 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 SLC35G1Q2M3R5 365 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 TMEM63BQ5T3F8 832 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 HOMER1Q86YM7 354 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 ZNF654Q8IZM8 581 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-204ENST00000417122 LBHD1Q9BQE6 289 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-204ENST00000417122 UBE2OQ9C0C9 1292 aaKnown RBP18.16■□□□□ 0.5
ITGB1-204ENST00000417122 GPHNQ9NQX3 736 aaPredicted RBP18.16■□□□□ 0.5
ITGB1-204ENST00000417122 PDLIM7Q9NR12 457 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 Q9Y3F1 56 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 ELP1O95163 1332 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 LTBP2Q14767 1821 aa18.16■□□□□ 0.5
ITGB1-204ENST00000417122 RBM47A0AV96 593 aaKnown RBP18.15■□□□□ 0.5
ITGB1-204ENST00000417122 SH2B2O14492 632 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-204ENST00000417122 DYNC1LI2O43237 492 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-204ENST00000417122 PPP1R11O60927 126 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-204ENST00000417122 DDAH1O94760 285 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 PTGS1P23219 599 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 COL9A3Q14050 684 aaPredicted RBP18.15■□□□□ 0.5
ITGB1-204ENST00000417122 DUSP28Q4G0W2 176 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 TMTC2Q8N394 836 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 VTI1AQ96AJ9 217 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 TAAR1Q96RJ0 339 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 PIGSQ96S52 555 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 MAP3K14Q99558 947 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 MYL10Q9BUA6 226 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 WDR11Q9BZH6 1224 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 COL20A1Q9P218 1284 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 PCDHA1Q9Y5I3 950 aa18.15■□□□□ 0.5
ITGB1-204ENST00000417122 DNAH12Q6ZR08 3092 aa18.14■□□□□ 0.5
ITGB1-204ENST00000417122 CCDC69A6NI79 296 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 CYTH3O43739 400 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 PQBP1O60828 265 aaKnown RBP18.14■□□□□ 0.49
ITGB1-204ENST00000417122 CFBP00751 764 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 CLTBP09497 229 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 TRAF1Q13077 416 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 FSCN1Q16658 493 aaKnown RBP18.14■□□□□ 0.49
ITGB1-204ENST00000417122 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 SH3RF1Q7Z6J0 888 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 TDHQ8IZJ6 230 aa18.14■□□□□ 0.49
ITGB1-204ENST00000417122 CTCFLQ8NI51 663 aaPredicted RBP18.14■□□□□ 0.49
ITGB1-204ENST00000417122 NSUN6Q8TEA1 469 aaKnown RBP18.14■□□□□ 0.49
ITGB1-204ENST00000417122 BAZ2BQ9UIF8 2168 aaKnown RBP18.13■□□□□ 0.49
ITGB1-204ENST00000417122 PNMA6FA0A0J9YX94 578 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 TRIM43BA6NCK2 446 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 OPLAHO14841 1288 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 ZEB2O60315 1214 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 KIF5BP33176 963 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 LIFRP42702 1097 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 HSD17B4P51659 736 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 ANKRD33Q7Z3H0 272 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 TRIM43Q96BQ3 446 aaPredicted RBP18.13■□□□□ 0.49
ITGB1-204ENST00000417122 TOX2Q96NM4 488 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 RMDN3Q96TC7 470 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 LRRC2Q9BYS8 371 aa18.13■□□□□ 0.49
ITGB1-204ENST00000417122 A0A0U1RQG5 324 aaPredicted RBP18.12■□□□□ 0.49
ITGB1-204ENST00000417122 DCDC2CA8MYV0 355 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 GHRHRQ02643 423 aa18.12■□□□□ 0.49
ITGB1-204ENST00000417122 PPP2R5BQ15173 497 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms