RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 VTA1Q9NP79 307 aa18.33■□□□□ 0.52
RHBDF1-202ENST00000417043 UMODL1Q5DID0 1318 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 GRXCR1A8MXD5 290 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 TLR3O15455 904 aaKnown RBP18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 SNHG28P0DPA3 235 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 AAMPQ13685 434 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 TMEM240Q5SV17 173 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 RNF207Q6ZRF8 634 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 ESR2Q92731 530 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 TRPV6Q9H1D0 765 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 RNF41Q9H4P4 317 aaPredicted RBP18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 DIAPH3Q9NSV4 1193 aa18.32■□□□□ 0.52
RHBDF1-202ENST00000417043 B4E1Z4 1266 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 KDM4AO75164 1064 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 RPS6P62753 249 aaKnown RBP18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 PPIGQ13427 754 aaKnown RBP eCLIP18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 USH1GQ495M9 461 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 DUSP28Q4G0W2 176 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 ZNF365Q70YC5 407 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 TMEM199Q8N511 208 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 WDR11Q9BZH6 1224 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 ADD3Q9UEY8 706 aaKnown RBP18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 Q9Y3F1 56 aa18.31■□□□□ 0.52
RHBDF1-202ENST00000417043 ZEB2O60315 1214 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 CABYRO75952 493 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 DNAJB2P25686 324 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 DGKHQ86XP1 1220 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 PPP1R13LQ8WUF5 828 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 TBC1D5Q92609 795 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 IL25Q9H293 177 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 LAMA4Q16363 1823 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 VCANP13611 3396 aa18.3■□□□□ 0.52
RHBDF1-202ENST00000417043 B4GALT4O60513 344 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 PBX2P40425 430 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 CCL23P55773 120 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 GRIN2CQ14957 1233 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 PNMA1Q8ND90 353 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 MAFAQ8NHW3 353 aaPredicted RBP18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 COPS5Q92905 334 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 HIPK3Q9H422 1215 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 ZSWIM5Q9P217 1185 aa18.29■□□□□ 0.52
RHBDF1-202ENST00000417043 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
RHBDF1-202ENST00000417043 MYL3P08590 195 aa18.28■□□□□ 0.52
RHBDF1-202ENST00000417043 PDE4DQ08499 809 aa18.28■□□□□ 0.52
RHBDF1-202ENST00000417043 CXXC1Q9P0U4 656 aaPredicted RBP18.28■□□□□ 0.52
RHBDF1-202ENST00000417043 MYH6P13533 1939 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 WDR19Q8NEZ3 1342 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 FOSL2P15408 326 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 CDC37Q16543 378 aaPredicted RBP18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 GPATCH4Q5T3I0 446 aaKnown RBP18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 RASIP1Q5U651 963 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 IQCA1Q86XH1 822 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 ADGRF4Q8IZF3 695 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 OR6J1Q8NGC5 347 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 ZSCAN10Q96SZ4 725 aaPredicted RBP18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 DSCC1Q9BVC3 393 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 COL25A1Q9BXS0 654 aaPredicted RBP18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 PBX4Q9BYU1 374 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 ZNF576Q9H609 170 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 KAT14Q9H8E8 782 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 VAT1LQ9HCJ6 419 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 IL23AQ9NPF7 189 aa18.27■□□□□ 0.52
RHBDF1-202ENST00000417043 CHD9Q3L8U1 2897 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 EDNRBP24530 442 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 PDE4AP27815 886 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 PURAQ00577 322 aaKnown RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 IMMTQ16891 758 aaKnown RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 ENAHQ8N8S7 591 aaPredicted RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 ANKS1AQ92625 1134 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 TIFAQ96CG3 184 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 NOC4LQ9BVI4 516 aaKnown RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 WNT8AQ9H1J5 351 aa18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 ALDH8A1Q9H2A2 487 aaPredicted RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 TRMT13Q9NUP7 481 aaKnown RBP18.26■□□□□ 0.51
RHBDF1-202ENST00000417043 GBF1Q92538 1859 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 LOC102724159A0A0B4J2E5 919 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 HIP1O00291 1037 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 ARIH2O95376 493 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 FGBP02675 491 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 CYP2C9P11712 490 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 PWP2Q15269 919 aaKnown RBP18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 PSRC1Q6PGN9 363 aaPredicted RBP18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 OTOP2Q7RTS6 562 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 DNERQ8NFT8 737 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 SCLYQ96I15 445 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 TAAR1Q96RJ0 339 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 COL20A1Q9P218 1284 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 PNMA2Q9UL42 364 aa18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
RHBDF1-202ENST00000417043 TNKSO95271 1327 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 SCN5AQ14524 2016 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 TMEM265A0A087WTH1 108 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 TXNP10599 105 aaKnown RBP18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 CPT1AP50416 773 aa18.24■□□□□ 0.51
RHBDF1-202ENST00000417043 PPP2R5BQ15173 497 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms