RNA–Protein interactions for RNA: ENST00000417036.1

THUMPD3-203, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-203ENST00000417036 ANKRD33Q7Z3H0 272 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 SGMS1Q86VZ5 419 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 ANKS1AQ92625 1134 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 TOX2Q96NM4 488 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 TSHZ2Q9NRE2 1034 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 BRPF3Q9ULD4 1205 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 SYNRGQ9UMZ2 1314 aa16.1■□□□□ 0.17
THUMPD3-203ENST00000417036 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 NDUFB10O96000 172 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 APOA5Q6Q788 366 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 FBXL16Q8N461 479 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 USP38Q8NB14 1042 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 SLC12A7Q9Y666 1083 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 MUC3AQ02505 3323 aa16.09■□□□□ 0.17
THUMPD3-203ENST00000417036 MOXD2PA6NHM9 499 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 DDAH1O94760 285 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 ANKRD1Q15327 319 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 KCNA10Q16322 511 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 CCDC96Q2M329 555 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 SNRNP48Q6IEG0 339 aaKnown RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 CATIPQ7Z7H3 387 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 MSL3Q8N5Y2 521 aaKnown RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 MKL1Q969V6 931 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 NUP88Q99567 741 aaPredicted RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 TEX13BQ9BXU2 312 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 ALDH8A1Q9H2A2 487 aaPredicted RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 ZHX1Q9UKY1 873 aaPredicted RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 TPCN1Q9ULQ1 816 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 ISY1Q9ULR0 285 aaKnown RBP16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 SYNGAP1Q96PV0 1343 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 NID2Q14112 1375 aa16.08■□□□□ 0.16
THUMPD3-203ENST00000417036 GOLGA8AA7E2F4 631 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 ZBTB43O43298 467 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 TIMP1P01033 207 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 PDHBP11177 359 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 STK3Q13188 491 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 TJAP1Q5JTD0 557 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 SLFN13Q68D06 897 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 KLHDC9Q8NEP7 349 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 TIFAQ96CG3 184 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 SLF1Q9BQI6 1058 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 ZNF576Q9H609 170 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 TBX21Q9UL17 535 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 MROH7Q68CQ1 1323 aa16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 FRMPD2Q68DX3 1309 aaPredicted RBP16.07■□□□□ 0.16
THUMPD3-203ENST00000417036 F5H6K3 240 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 SNAI1O95863 264 aaPredicted RBP16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 SLC4A3P48751 1232 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 METAP2P50579 478 aaKnown RBP eCLIP16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 KLRC3Q07444 240 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 TROAPQ12815 778 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 PPIGQ13427 754 aaKnown RBP eCLIP16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 GRM4Q14833 912 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 MFSD5Q6N075 450 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 GLT1D1Q96MS3 346 aa16.06■□□□□ 0.16
THUMPD3-203ENST00000417036 ELP1O95163 1332 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 DNAJC25-GNG10A0A024R161 153 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 MYADML2A6NDP7 307 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 C6orf222P0C671 652 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 GOLGA8HP0CJ92 632 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 EVCP57679 992 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 CCSAPQ6IQ19 270 aaPredicted RBP16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 CCDC174Q6PII3 467 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 MAMDC4Q6UXC1 1216 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 SYNE3Q6ZMZ3 975 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 TMTC2Q8N394 836 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 VTI1AQ96AJ9 217 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 CHD7Q9P2D1 2997 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 RIPK3Q9Y572 518 aa16.05■□□□□ 0.16
THUMPD3-203ENST00000417036 SNHG28P0DPA3 235 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 SLC1A4P43007 532 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 ZNF543Q08ER8 600 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 ST3GAL1Q11201 340 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 ACVR2BQ13705 512 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 ME3Q16798 604 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 RTN1Q16799 776 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 KCTD1Q719H9 257 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 ZNF467Q7Z7K2 595 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 PCSK9Q8NBP7 692 aaKnown RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 GMCL1Q96IK5 515 aa16.04■□□□□ 0.16
THUMPD3-203ENST00000417036 GAS2L1Q99501 681 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms