RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZNF365Q70YC5 407 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 ESR2Q92731 530 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 HIPK3Q9H422 1215 aa16.96■□□□□ 0.31
PAF1-202ENST00000416728 GRIN2DO15399 1336 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 ZNF213O14771 459 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 SNHG28P0DPA3 235 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 PSMC6P62333 389 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 SLC30A10Q6XR72 485 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 RNF207Q6ZRF8 634 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 CHD1LQ86WJ1 897 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 CLEC4DQ8WXI8 215 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 MPHOSPH6Q99547 160 aaKnown RBP16.95■□□□□ 0.3
PAF1-202ENST00000416728 COL25A1Q9BXS0 654 aaPredicted RBP16.95■□□□□ 0.3
PAF1-202ENST00000416728 WDR11Q9BZH6 1224 aa16.95■□□□□ 0.3
PAF1-202ENST00000416728 NEDD4P46934 1319 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 WDR19Q8NEZ3 1342 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 LRRC37A2A6NM11 1700 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 GRIN2CQ14957 1233 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
PAF1-202ENST00000416728 RASIP1Q5U651 963 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 PLEKHM2Q8IWE5 1019 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 MTIF3Q9H2K0 278 aaKnown RBP16.94■□□□□ 0.3
PAF1-202ENST00000416728 ZNF576Q9H609 170 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 IL23AQ9NPF7 189 aa16.94■□□□□ 0.3
PAF1-202ENST00000416728 B4GALT4O60513 344 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 NT5C2P49902 561 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 RPS6P62753 249 aaKnown RBP16.93■□□□□ 0.3
PAF1-202ENST00000416728 NUCB1Q02818 461 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 PDE4DQ08499 809 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 DGKHQ86XP1 1220 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 NOC4LQ9BVI4 516 aaKnown RBP16.93■□□□□ 0.3
PAF1-202ENST00000416728 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 OSBPL3Q9H4L5 887 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 POLR3EQ9NVU0 708 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 UMODL1Q5DID0 1318 aa16.93■□□□□ 0.3
PAF1-202ENST00000416728 RBM47A0AV96 593 aaKnown RBP16.92■□□□□ 0.3
PAF1-202ENST00000416728 GRXCR1A8MXD5 290 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 GOLGA8HP0CJ92 632 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 CPT1AP50416 773 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 CCL23P55773 120 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 CCDC178Q5BJE1 867 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 CWC27Q6UX04 472 aaKnown RBP16.92■□□□□ 0.3
PAF1-202ENST00000416728 DNERQ8NFT8 737 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 OR6J1Q8NGC5 347 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 HERVK_113Q902F9 699 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 YTHDC1Q96MU7 727 aaKnown RBP16.92■□□□□ 0.3
PAF1-202ENST00000416728 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 ALDH8A1Q9H2A2 487 aaPredicted RBP16.92■□□□□ 0.3
PAF1-202ENST00000416728 CUL9Q8IWT3 2517 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 RAD50Q92878 1312 aa16.92■□□□□ 0.3
PAF1-202ENST00000416728 B4DLN1 442 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 HIP1O00291 1037 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 KDM4AO75164 1064 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 IGHDP01880 384 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 FGBP02675 491 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 MYL3P08590 195 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 PBX2P40425 430 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 MRPL12P52815 198 aaKnown RBP16.91■□□□□ 0.3
PAF1-202ENST00000416728 PURAQ00577 322 aaKnown RBP16.91■□□□□ 0.3
PAF1-202ENST00000416728 PPP2R5BQ15173 497 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 USH1GQ495M9 461 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
PAF1-202ENST00000416728 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 GPHNQ9NQX3 736 aaPredicted RBP16.91■□□□□ 0.3
PAF1-202ENST00000416728 UNC80Q8N2C7 3258 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 CDH23Q9H251 3354 aa16.91■□□□□ 0.3
PAF1-202ENST00000416728 NKRFO15226 690 aaKnown RBP eCLIP16.9■□□□□ 0.3
PAF1-202ENST00000416728 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 EDNRBP24530 442 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 RAB30Q15771 203 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 SCFD2Q8WU76 684 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 CPVLQ9H3G5 476 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 KAT14Q9H8E8 782 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 LCTP09848 1927 aa16.9■□□□□ 0.3
PAF1-202ENST00000416728 CDC37Q16543 378 aaPredicted RBP16.89■□□□□ 0.3
PAF1-202ENST00000416728 OTOP2Q7RTS6 562 aa16.89■□□□□ 0.3
PAF1-202ENST00000416728 RPUSD2Q8IZ73 545 aaKnown RBP16.89■□□□□ 0.3
PAF1-202ENST00000416728 RGS22Q8NE09 1264 aa16.89■□□□□ 0.3
PAF1-202ENST00000416728 MTG1Q9BT17 334 aaPredicted RBP16.89■□□□□ 0.3
PAF1-202ENST00000416728 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.3
PAF1-202ENST00000416728 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.3
PAF1-202ENST00000416728 CXXC1Q9P0U4 656 aaPredicted RBP16.89■□□□□ 0.3
PAF1-202ENST00000416728 MSRAQ9UJ68 235 aa16.89■□□□□ 0.3
PAF1-202ENST00000416728 B4E1Z4 1266 aa16.89■□□□□ 0.29
PAF1-202ENST00000416728 IMMTQ16891 758 aaKnown RBP16.89■□□□□ 0.29
PAF1-202ENST00000416728 ASPRV1Q53RT3 343 aa16.89■□□□□ 0.29
PAF1-202ENST00000416728 FAM47CQ5HY64 1035 aa16.89■□□□□ 0.29
PAF1-202ENST00000416728 EXOC6Q8TAG9 804 aa16.89■□□□□ 0.29
PAF1-202ENST00000416728 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
PAF1-202ENST00000416728 ZSCAN10Q96SZ4 725 aaPredicted RBP16.89■□□□□ 0.29
PAF1-202ENST00000416728 GAS2L1Q99501 681 aaPredicted RBP16.89■□□□□ 0.29
PAF1-202ENST00000416728 TRMT13Q9NUP7 481 aaKnown RBP16.89■□□□□ 0.29
PAF1-202ENST00000416728 TNKSO95271 1327 aa16.88■□□□□ 0.29
PAF1-202ENST00000416728 ABCB11O95342 1321 aa16.88■□□□□ 0.29
PAF1-202ENST00000416728 KPNA6O60684 536 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms