RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 FCHSD1Q86WN1 690 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 APOBEC3FQ8IUX4 373 aaKnown RBP12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 DRC7Q8IY82 874 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 CCDC34Q96HJ3 373 aa12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 RRAGDQ9NQL2 400 aaPredicted RBP12.07□□□□□ -0.48
SMPD4P1-201ENST00000416717 OPLAHO14841 1288 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 CFBP00751 764 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 CUL4BQ13620 913 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SH3RF1Q7Z6J0 888 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 CABP7Q86V35 215 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SMYD4Q8IYR2 804 aaPredicted RBP12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 MTRQ99707 1265 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 DISC1Q9NRI5 854 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 POTEMA6NI47 508 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SMC2O95347 1197 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 LMOD1P29536 600 aaPredicted RBP12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 ZNF75DP51815 510 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SPP2Q13103 211 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 HSP90AA4PQ58FG1 418 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 DCAF15Q66K64 600 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 ELOA2Q8IYF1 753 aaPredicted RBP12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 LRRC15Q8TF66 581 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 MTMR9Q96QG7 549 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 TANGO6Q9C0B7 1094 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 CCDC39Q9UFE4 941 aa12.06□□□□□ -0.48
SMPD4P1-201ENST00000416717 SPDYE3A6NKU9 549 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 ESPNB1AK53 854 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 PLCG1P19174 1290 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 DPYDQ12882 1025 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 DHX8Q14562 1220 aaKnown RBP12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 NT5DC1Q5TFE4 455 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 C9orf131Q5VYM1 1079 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 GLT8D2Q9H1C3 349 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 TTC12Q9H892 705 aaPredicted RBP12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 FEM1BQ9UK73 627 aa12.05□□□□□ -0.48
SMPD4P1-201ENST00000416717 UBXN2AP68543 259 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 ARHGAP4P98171 946 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 MORC3Q14149 939 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 NCAPHQ15003 741 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 TMEM266Q2M3C6 531 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 NAALADL2Q58DX5 795 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 KLHL10Q6JEL2 608 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 CPXCR1Q8N123 301 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 ZFP91Q96JP5 570 aaPredicted RBP12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 AGBL1Q96MI9 1066 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 BPIFA3Q9BQP9 254 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 PPP4R3AQ6IN85 833 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 LDHDQ86WU2 507 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 PLA2G4DQ86XP0 818 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 HAS1Q92839 578 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 CCSER1Q9C0I3 900 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 PICK1Q9NRD5 415 aa12.04□□□□□ -0.48
SMPD4P1-201ENST00000416717 SMTNL1A8MU46 457 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 COBLO75128 1261 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 FLOT1O75955 427 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 FMR1Q06787 632 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 AP3B2Q13367 1082 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 PRR16Q569H4 304 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 SCYL3Q8IZE3 742 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 IGSF22Q8N9C0 903 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 SPATA20Q8TB22 786 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 AK8Q96MA6 479 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 PYM1Q9BRP8 204 aaKnown RBP12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 KIAA1683Q9H0B3 1180 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 HOMER2Q9NSB8 354 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 EMILIN3Q9NT22 766 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 NRBP1Q9UHY1 535 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 ZHX2Q9Y6X8 837 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 ADM5C9JUS6 153 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 ATP1A3P13637 1013 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 VCAM1P19320 739 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 MYL5Q02045 173 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 ORC2Q13416 577 aaPredicted RBP12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 SLF1Q9BQI6 1058 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 CCPG1Q9ULG6 757 aa12.03□□□□□ -0.48
SMPD4P1-201ENST00000416717 SSC5DA1L4H1 1573 aa12.02□□□□□ -0.48
SMPD4P1-201ENST00000416717 WDR46O15213 610 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 GTPBP6O43824 516 aaPredicted RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 PTPRAP18433 802 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 HMGCS2P54868 508 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 STX17P56962 302 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 TPM4P67936 248 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 ZSCAN30Q86W11 494 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 CYP2W1Q8TAV3 490 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 SNX29Q8TEQ0 813 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 HOOK2Q96ED9 719 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 HSD3B7Q9H2F3 369 aa12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 RAVER2Q9HCJ3 691 aaKnown RBP12.02□□□□□ -0.49
SMPD4P1-201ENST00000416717 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms