RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 ZNF536O15090 1300 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 ATP2A1O14983 1001 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 CETPP11597 493 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 GCFC2P16383 781 aaKnown RBP16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 ATP2C1P98194 919 aaPredicted RBP16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 FSIP1Q8NA03 581 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 DDX19AQ9NUU7 478 aaKnown RBP16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 PNMA3Q9UL41 463 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
HMGA1P1-201ENST00000415560 LOC285556D6RIA3 1793 aa16.21■□□□□ 0.18
HMGA1P1-201ENST00000415560 ZBTB48P10074 688 aaPredicted RBP16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 PRPHP41219 470 aa16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 FMR1Q06787 632 aaKnown RBP eCLIP16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 AXDND1Q5T1B0 1012 aaPredicted RBP16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 CCDC183Q5T5S1 534 aa16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 PPP4R3AQ6IN85 833 aa16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 DTHD1Q6ZMT9 781 aa16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 GTF3C2Q8WUA4 911 aaPredicted RBP16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 WNK4Q96J92 1243 aa16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 GZF1Q9H116 711 aaPredicted RBP16.2■□□□□ 0.18
HMGA1P1-201ENST00000415560 SPDYE16A6NNV3 312 aaPredicted RBP16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 MARCH6O60337 910 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 NEMFO60524 1076 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 STAT3P40763 770 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 FAM160A1Q05DH4 1040 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 SNRNP48Q6IEG0 339 aaKnown RBP16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 MOXD1Q6UVY6 613 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 FCHSD1Q86WN1 690 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 FBXO2Q9UK22 296 aaPredicted RBP16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 RLFQ13129 1914 aa16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 COL11A1P12107 1806 aaPredicted RBP16.19■□□□□ 0.18
HMGA1P1-201ENST00000415560 CTAGE5O15320 804 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 KINO60870 393 aaKnown RBP16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 HOXA13P31271 388 aaPredicted RBP16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 ZNF76P36508 570 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 LONP1P36776 959 aaKnown RBP16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 PLS1Q14651 629 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 RESP18Q5W5W9 173 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 REPS2Q8NFH8 660 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 CCDC34Q96HJ3 373 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 P2RX7Q99572 595 aaKnown RBP16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 PYM1Q9BRP8 204 aaKnown RBP16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 FBXO40Q9UH90 709 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 SLC45A1Q9Y2W3 748 aa16.18■□□□□ 0.18
HMGA1P1-201ENST00000415560 MYH7BA7E2Y1 1941 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 A0A1B0GVL5 298 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 OPLAHO14841 1288 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CYP3A4P08684 503 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 OR52Z1P0C646 297 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 LIG1P18858 919 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 COPB2P35606 906 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 SREBF1P36956 1147 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 TXLNAP40222 546 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 HSD17B4P51659 736 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 HUNKP57058 714 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 ARHGAP4P98171 946 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 GHRHRQ02643 423 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CALCRLQ16602 461 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 TMEM266Q2M3C6 531 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CST9Q5W186 159 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 C4orf32Q8N8J7 132 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CHST13Q8NET6 341 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CLIC6Q96NY7 704 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 RAB34Q9BZG1 259 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 ASCC2Q9H1I8 757 aaPredicted RBP16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 NUP62CLQ9H1M0 184 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 RNF146Q9NTX7 359 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 DACT1Q9NYF0 836 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 TMEM63CQ9P1W3 806 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 SMCHD1A6NHR9 2005 aa16.17■□□□□ 0.18
HMGA1P1-201ENST00000415560 CYP3A7-CYP3A51PA0A087WV96 503 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 CCL15-CCL14A0A0B4J2E2 113 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 VWA3AA6NCI4 1184 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 WNT7AO00755 349 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 SLC25A27O95847 323 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 CYP3A7P24462 503 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 GJA5P36382 358 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 SYKP43405 635 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 HERVK_113P62684 666 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 CCL15Q16663 113 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 SPRYD7Q5W111 196 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 TBC1D5Q92609 795 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 ACAD9Q9H845 621 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 HOMER2Q9NSB8 354 aa16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 ZNF214Q9UL59 606 aaPredicted RBP16.16■□□□□ 0.18
HMGA1P1-201ENST00000415560 FAM237AA0A1B0GTK4 181 aa16.15■□□□□ 0.18
HMGA1P1-201ENST00000415560 NR1I2O75469 434 aa16.15■□□□□ 0.18
HMGA1P1-201ENST00000415560 ZNF202O95125 648 aa16.15■□□□□ 0.18
HMGA1P1-201ENST00000415560 PFKFB1P16118 471 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms