RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 PSRC1Q6PGN9 363 aaPredicted RBP28.73■■■□□ 2.19
AC005540.1-201ENST00000413911 SLC30A10Q6XR72 485 aa28.73■■■□□ 2.19
AC005540.1-201ENST00000413911 VWCEQ96DN2 955 aa28.73■■■□□ 2.19
AC005540.1-201ENST00000413911 NOC4LQ9BVI4 516 aaKnown RBP28.73■■■□□ 2.19
AC005540.1-201ENST00000413911 CCL23P55773 120 aa28.72■■■□□ 2.19
AC005540.1-201ENST00000413911 DUSP28Q4G0W2 176 aa28.72■■■□□ 2.19
AC005540.1-201ENST00000413911 TBC1D10CQ8IV04 446 aa28.72■■■□□ 2.19
AC005540.1-201ENST00000413911 HERVK_113Q902F9 699 aa28.72■■■□□ 2.19
AC005540.1-201ENST00000413911 WNT8AQ9H1J5 351 aa28.72■■■□□ 2.19
AC005540.1-201ENST00000413911 ZMYM6O95789 1325 aa28.71■■■□□ 2.19
AC005540.1-201ENST00000413911 ZEB2O60315 1214 aa28.71■■■□□ 2.19
AC005540.1-201ENST00000413911 CHD7Q9P2D1 2997 aa28.71■■■□□ 2.19
AC005540.1-201ENST00000413911 PTPDC1A2A3K4 754 aa28.7■■■□□ 2.18
AC005540.1-201ENST00000413911 ZNF543Q08ER8 600 aa28.7■■■□□ 2.18
AC005540.1-201ENST00000413911 WDR11Q9BZH6 1224 aa28.7■■■□□ 2.18
AC005540.1-201ENST00000413911 LNPKQ9C0E8 428 aa28.7■■■□□ 2.18
AC005540.1-201ENST00000413911 ADD3Q9UEY8 706 aaKnown RBP28.7■■■□□ 2.18
AC005540.1-201ENST00000413911 CCDC171Q6TFL3 1326 aa28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 TTC28Q96AY4 2481 aa28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 RBM47A0AV96 593 aaKnown RBP28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 SNHG28P0DPA3 235 aa28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 PRDM12Q9H4Q4 367 aa28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 PRDM6Q9NQX0 595 aa28.69■■■□□ 2.18
AC005540.1-201ENST00000413911 FGBP02675 491 aa28.68■■■□□ 2.18
AC005540.1-201ENST00000413911 CALML3P27482 149 aa28.68■■■□□ 2.18
AC005540.1-201ENST00000413911 AKNAD1Q5T1N1 836 aa28.68■■■□□ 2.18
AC005540.1-201ENST00000413911 OTOP2Q7RTS6 562 aa28.68■■■□□ 2.18
AC005540.1-201ENST00000413911 ALDH8A1Q9H2A2 487 aaPredicted RBP28.68■■■□□ 2.18
AC005540.1-201ENST00000413911 MUC3AQ02505 3323 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 TICAM2Q86XR7 235 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 SCLYQ96I15 445 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 TTC14Q96N46 770 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 CPVLQ9H3G5 476 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 TRMT13Q9NUP7 481 aaKnown RBP28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 YBX2Q9Y2T7 364 aaKnown RBP28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 NEDD4P46934 1319 aa28.67■■■□□ 2.18
AC005540.1-201ENST00000413911 TRIM6-TRIM34B2RNG4 842 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 RPS6P62753 249 aaKnown RBP28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 PURAQ00577 322 aaKnown RBP28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 ADGRE1Q14246 886 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 RNF207Q6ZRF8 634 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 MFSD6Q6ZSS7 791 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 PPP1R13LQ8WUF5 828 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 RILPL2Q969X0 211 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 ZKSCAN3Q9BRR0 538 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 SEZ6LQ9BYH1 1024 aa28.66■■■□□ 2.18
AC005540.1-201ENST00000413911 LOC102724159A0A0B4J2E5 919 aa28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 GOLGA8HP0CJ92 632 aa28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 EDNRBP24530 442 aa28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 PWP2Q15269 919 aaKnown RBP28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 NKX2-4Q9H2Z4 354 aa28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 GBF1Q92538 1859 aa28.65■■■□□ 2.18
AC005540.1-201ENST00000413911 MYL3P08590 195 aa28.64■■■□□ 2.18
AC005540.1-201ENST00000413911 CYP2C9P11712 490 aa28.64■■■□□ 2.18
AC005540.1-201ENST00000413911 SDSP20132 328 aa28.64■■■□□ 2.18
AC005540.1-201ENST00000413911 COPS5Q92905 334 aa28.64■■■□□ 2.18
AC005540.1-201ENST00000413911 WDR19Q8NEZ3 1342 aa28.64■■■□□ 2.17
AC005540.1-201ENST00000413911 MYO9BQ13459 2157 aa28.64■■■□□ 2.17
AC005540.1-201ENST00000413911 B4GALNT3Q6L9W6 998 aa28.63■■■□□ 2.17
AC005540.1-201ENST00000413911 SMC5Q8IY18 1101 aa28.63■■■□□ 2.17
AC005540.1-201ENST00000413911 OR6J1Q8NGC5 347 aa28.63■■■□□ 2.17
AC005540.1-201ENST00000413911 UBA5Q9GZZ9 404 aa28.63■■■□□ 2.17
AC005540.1-201ENST00000413911 POLR3EQ9NVU0 708 aa28.63■■■□□ 2.17
AC005540.1-201ENST00000413911 PCP11498 1178 aaKnown RBP28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 RABGGTBP53611 331 aa28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 RAB30Q15771 203 aa28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 PPM1EQ8WY54 764 aa28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 MSRAQ9UJ68 235 aa28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 TNKSO95271 1327 aa28.62■■■□□ 2.17
AC005540.1-201ENST00000413911 CPT1AP50416 773 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 PDE4DQ08499 809 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 USH1GQ495M9 461 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 PLEKHM2Q8IWE5 1019 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 TBC1D5Q92609 795 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 GAS2L1Q99501 681 aaPredicted RBP28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 SCN10AQ9Y5Y9 1956 aa28.61■■■□□ 2.17
AC005540.1-201ENST00000413911 ARIH2O95376 493 aa28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 MYOGP15173 224 aa28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 NBPF20Q3BBV1 942 aa28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 MTG1Q9BT17 334 aaPredicted RBP28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 MTIF3Q9H2K0 278 aaKnown RBP28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 REV3LO60673 3130 aa28.6■■■□□ 2.17
AC005540.1-201ENST00000413911 IGHDP01880 384 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 TTLL4Q14679 1199 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 PPP2R5BQ15173 497 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 DGKHQ86XP1 1220 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 RPUSD2Q8IZ73 545 aaKnown RBP28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 DNERQ8NFT8 737 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 ESR2Q92731 530 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 RNF41Q9H4P4 317 aaPredicted RBP28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 PNMA2Q9UL42 364 aa28.59■■■□□ 2.17
AC005540.1-201ENST00000413911 A6NJR5 290 aa28.58■■■□□ 2.17
AC005540.1-201ENST00000413911 GPATCH4Q5T3I0 446 aaKnown RBP28.58■■■□□ 2.17
AC005540.1-201ENST00000413911 SCFD2Q8WU76 684 aa28.58■■■□□ 2.17
AC005540.1-201ENST00000413911 SLC4A7Q9Y6M7 1214 aa28.58■■■□□ 2.17
AC005540.1-201ENST00000413911 SCN5AQ14524 2016 aa28.58■■■□□ 2.17
AC005540.1-201ENST00000413911 ZNF213O14771 459 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 KDM4AO75164 1064 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 SUPT20HL2P0C7V6 817 aa28.57■■■□□ 2.16
AC005540.1-201ENST00000413911 TJAP1Q5JTD0 557 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms