RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 OTUD7AQ8TE49 926 aaPredicted RBP9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 NUP133Q8WUM0 1156 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPM1EQ8WY54 764 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TSC1Q92574 1164 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 HAUS7Q99871 368 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 SLF1Q9BQI6 1058 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TEX13BQ9BXU2 312 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 PPP1R12CQ9BZL4 782 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 PRDM12Q9H4Q4 367 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 CHD7Q9P2D1 2997 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 CHD9Q3L8U1 2897 aa9.84□□□□□ -0.83
UPF3AP1-201ENST00000413731 COL4A4P53420 1690 aaPredicted RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 MROH7Q68CQ1 1323 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 PRRC2BQ5JSZ5 2229 aaKnown RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 DNAJC25-GNG10A0A024R161 153 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 DUSP11O75319 330 aaKnown RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 NDUFB10O96000 172 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 NEFLP07196 543 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 C6orf222P0C671 652 aaPredicted RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 ACRP10323 421 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 ADGRE1Q14246 886 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 CTR9Q6PD62 1173 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 MAMDC4Q6UXC1 1216 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCDC129Q6ZRS4 1044 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 FAM126BQ8IXS8 530 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 SMC5Q8IY18 1101 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 AMOTL1Q8IY63 956 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 MSL3Q8N5Y2 521 aaKnown RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 TATDN2Q93075 761 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 GLT1D1Q96MS3 346 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 GAS2L1Q99501 681 aaPredicted RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 UPF3AQ9H1J1 476 aaKnown RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 THEGQ9P2T0 379 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 FAM184BQ9ULE4 1060 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 SLC4A4Q9Y6R1 1079 aa9.83□□□□□ -0.84
UPF3AP1-201ENST00000413731 PTPRSQ13332 1948 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 A0A0U1RQG5 324 aaPredicted RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 IGHDP01880 384 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ASGR1P07306 291 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 RASA1P20936 1047 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 CDK7P50613 346 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ACVR2BQ13705 512 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ZSCAN25Q6NSZ9 544 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 PSRC1Q6PGN9 363 aaPredicted RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ZNF365Q70YC5 407 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ARMCX2Q7L311 632 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 CPXCR1Q8N123 301 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 STK11IPQ8N1F8 1099 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ADAMTS19Q8TE59 1207 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 DDX11Q96FC9 970 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 PUS7LQ9H0K6 701 aaKnown RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 RAVER2Q9HCJ3 691 aaKnown RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 CXXC1Q9P0U4 656 aaPredicted RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ARPP21Q9UBL0 812 aaPredicted RBP9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ASTN1O14525 1302 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 ELP1O95163 1332 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 UMODL1Q5DID0 1318 aa9.82□□□□□ -0.84
UPF3AP1-201ENST00000413731 BRWD1Q9NSI6 2320 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 ARVCFO00192 962 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 CTAGE5O15320 804 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 FDX1P10109 184 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 PTGS1P23219 599 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 CYP2C18P33260 490 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 GJA9P57773 515 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 UBE3CQ15386 1083 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 CCDC144BQ3MJ40 725 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 AKNAD1Q5T1N1 836 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 CHD1LQ86WJ1 897 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 LRRC47Q8N1G4 583 aaKnown RBP9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 TMEM199Q8N511 208 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 PCSK9Q8NBP7 692 aaKnown RBP9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 TET1Q8NFU7 2136 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 FSD1Q9BTV5 496 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 KATNBL1Q9H079 304 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 YBX2Q9Y2T7 364 aaKnown RBP9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 REV3LO60673 3130 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 SCN10AQ9Y5Y9 1956 aa9.81□□□□□ -0.84
UPF3AP1-201ENST00000413731 IGKV6D-41A0A0C4DH26 115 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 PPP1R3GB7ZBB8 358 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 F5H6K3 240 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 ATP2A1O14983 1001 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 TLR3O15455 904 aaKnown RBP9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 BRD1O95696 1058 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 CD4P01730 458 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 USP46P62068 366 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 BEX3Q00994 111 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 NUCB1Q02818 461 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 KLRC3Q07444 240 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 VAC14Q08AM6 782 aa9.8□□□□□ -0.84
UPF3AP1-201ENST00000413731 KCNA1Q09470 495 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms