RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 MTMR9Q96QG7 549 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 NAP1L4Q99733 375 aaKnown RBP9.38□□□□□ -0.91
HDAC9-207ENST00000413509 ANO3Q9BYT9 981 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 MAF1Q9H063 256 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 TNMDQ9H2S6 317 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 KCNH3Q9ULD8 1083 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 MRPL11Q9Y3B7 192 aaKnown RBP9.38□□□□□ -0.91
HDAC9-207ENST00000413509 CSADQ9Y600 493 aa9.38□□□□□ -0.91
HDAC9-207ENST00000413509 FRMPD4Q14CM0 1322 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 VWA5AO00534 786 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 CXCL11O14625 94 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
HDAC9-207ENST00000413509 NEMFO60524 1076 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 CYP3A4P08684 503 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 OR52Z1P0C646 297 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 TAL1P17542 331 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-207ENST00000413509 DSG3P32926 999 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 CIITAP33076 1130 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 NF2P35240 595 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 SYKP43405 635 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 FXR2P51116 673 aaKnown RBP eCLIP9.37□□□□□ -0.91
HDAC9-207ENST00000413509 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
HDAC9-207ENST00000413509 PPIL2Q13356 520 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 MOGSQ13724 837 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 E2F4Q16254 413 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 USH1GQ495M9 461 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 USP49Q70CQ1 688 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 ERO1BQ86YB8 467 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
HDAC9-207ENST00000413509 AK8Q96MA6 479 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 TANGO6Q9C0B7 1094 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 TSPY26PQ9H489 355 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 FAM13BQ9NYF5 915 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 USP25Q9UHP3 1055 aa9.37□□□□□ -0.91
HDAC9-207ENST00000413509 RPTORQ8N122 1335 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 A0A087X0B3 334 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 VWA3AA6NCI4 1184 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 IRF6O14896 467 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 SLC37A4O43826 429 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 FLOT1O75955 427 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 TDP2O95551 362 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 POTEIP0CG38 1075 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 POTEJP0CG39 1038 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 HOXA7P31268 230 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 MRE11P49959 708 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 ARHGAP4P98171 946 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 TYRO3Q06418 890 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CAMK4Q16566 473 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 Q4G0T1 1027 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 TPRNQ4KMQ1 711 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 EAPPQ56P03 285 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 L1TD1Q5T7N2 865 aaKnown RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 LBX2Q6XYB7 198 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 KRBA2Q6ZNG9 492 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 SH3RF1Q7Z6J0 888 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 IGSF22Q8N9C0 903 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 PROCA1Q8NCQ7 364 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 LENG9Q96B70 501 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 EPSTI1Q96J88 318 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CLMNQ96JQ2 1002 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 AGBL1Q96MI9 1066 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CCSER1Q9C0I3 900 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 RBSNQ9H1K0 784 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 GRPEL1Q9HAV7 217 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 KCNMB3Q9NPA1 279 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 RNF216Q9NWF9 866 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 MAP3K20Q9NYL2 800 aaKnown RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 TMOD4Q9NZQ9 345 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 TUBE1Q9UJT0 475 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 ZNF214Q9UL59 606 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-207ENST00000413509 CCPG1Q9ULG6 757 aa9.36□□□□□ -0.91
HDAC9-207ENST00000413509 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-207ENST00000413509 GCOM1H8Y6P7 765 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-207ENST00000413509 SLC26A4O43511 780 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 ZBED4O75132 1171 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 POLR2MP0CAP2 368 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 CCDC192P0DO97 292 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 DEKP35659 375 aaKnown RBP9.35□□□□□ -0.91
HDAC9-207ENST00000413509 FKBP1BP68106 108 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 PRKG1Q13976 671 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 COG2Q14746 738 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 SPECC1Q5M775 1068 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 MOB2Q70IA6 237 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 ARMC9Q7Z3E5 817 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 SPATA20Q8TB22 786 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 HAS1Q92839 578 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 ATG4CQ96DT6 458 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 WNK4Q96J92 1243 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 PYM1Q9BRP8 204 aaKnown RBP9.35□□□□□ -0.91
HDAC9-207ENST00000413509 ELP3Q9H9T3 547 aa9.35□□□□□ -0.91
HDAC9-207ENST00000413509 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms