RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ITGA7Q13683 1181 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 TMEM240Q5SV17 173 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 ESR2Q92731 530 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 UBA5Q9GZZ9 404 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 AP5M1Q9H0R1 490 aa22.58■■□□□ 1.21
CPSF7-204ENST00000413232 RNF41Q9H4P4 317 aaPredicted RBP22.58■■□□□ 1.21
CPSF7-204ENST00000413232 GBF1Q92538 1859 aa22.58■■□□□ 1.2
CPSF7-204ENST00000413232 UMODL1Q5DID0 1318 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 KDM4AO75164 1064 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 ACRP10323 421 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 CALML3P27482 149 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 CYP2C18P33260 490 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 MFAP1P55081 439 aaKnown RBP22.57■■□□□ 1.2
CPSF7-204ENST00000413232 MYLIPQ8WY64 445 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 Q9Y3F1 56 aa22.57■■□□□ 1.2
CPSF7-204ENST00000413232 VCANP13611 3396 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 B4E1Z4 1266 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 RPS6P62753 249 aaKnown RBP22.56■■□□□ 1.2
CPSF7-204ENST00000413232 DUSP28Q4G0W2 176 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 RNF207Q6ZRF8 634 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 DGKHQ86XP1 1220 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 TRPV6Q9H1D0 765 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 DIAPH3Q9NSV4 1193 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 ADD3Q9UEY8 706 aaKnown RBP22.56■■□□□ 1.2
CPSF7-204ENST00000413232 SCN10AQ9Y5Y9 1956 aa22.56■■□□□ 1.2
CPSF7-204ENST00000413232 RBM47A0AV96 593 aaKnown RBP22.55■■□□□ 1.2
CPSF7-204ENST00000413232 GRXCR1A8MXD5 290 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 PDE4AP27815 886 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 TBC1D5Q92609 795 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 WDR11Q9BZH6 1224 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 ZSWIM5Q9P217 1185 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 WDR19Q8NEZ3 1342 aa22.55■■□□□ 1.2
CPSF7-204ENST00000413232 BAZ2BQ9UIF8 2168 aaKnown RBP22.55■■□□□ 1.2
CPSF7-204ENST00000413232 SCN5AQ14524 2016 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.54■■□□□ 1.2
CPSF7-204ENST00000413232 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.54■■□□□ 1.2
CPSF7-204ENST00000413232 TLR3O15455 904 aaKnown RBP22.54■■□□□ 1.2
CPSF7-204ENST00000413232 B4GALT4O60513 344 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 CABYRO75952 493 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 PPIGQ13427 754 aaKnown RBP eCLIP22.54■■□□□ 1.27e-8■■■□□ 16.3
CPSF7-204ENST00000413232 USH1GQ495M9 461 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 RASIP1Q5U651 963 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 ZNF365Q70YC5 407 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 PNMA1Q8ND90 353 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 ANKS1AQ92625 1134 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 DSCC1Q9BVC3 393 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 KIAA1217Q5T5P2 1943 aa22.54■■□□□ 1.2
CPSF7-204ENST00000413232 CHD9Q3L8U1 2897 aa22.53■■□□□ 1.2
CPSF7-204ENST00000413232 EDNRBP24530 442 aa22.53■■□□□ 1.2
CPSF7-204ENST00000413232 DNAJB2P25686 324 aa22.53■■□□□ 1.2
CPSF7-204ENST00000413232 GPATCH4Q5T3I0 446 aaKnown RBP22.53■■□□□ 1.2
CPSF7-204ENST00000413232 TMEM199Q8N511 208 aa22.53■■□□□ 1.2
CPSF7-204ENST00000413232 ENAHQ8N8S7 591 aaPredicted RBP22.53■■□□□ 1.2
CPSF7-204ENST00000413232 TRIP12Q14669 1992 aaPredicted RBP22.52■■□□□ 1.2
CPSF7-204ENST00000413232 LOC102724159A0A0B4J2E5 919 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 ZEB2O60315 1214 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 PBX2P40425 430 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 GRIN2CQ14957 1233 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 PWP2Q15269 919 aaKnown RBP22.52■■□□□ 1.2
CPSF7-204ENST00000413232 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.52■■□□□ 1.2
CPSF7-204ENST00000413232 PPP1R13LQ8WUF5 828 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 COPS5Q92905 334 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 VWCEQ96DN2 955 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 ZSCAN10Q96SZ4 725 aaPredicted RBP22.52■■□□□ 1.2
CPSF7-204ENST00000413232 HIPK3Q9H422 1215 aa22.52■■□□□ 1.2
CPSF7-204ENST00000413232 MYH7BA7E2Y1 1941 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 GSPT1P15170 499 aaKnown RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 CCL23P55773 120 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 PURAQ00577 322 aaKnown RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 CDC37Q16543 378 aaPredicted RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 IQCA1Q86XH1 822 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 ADGRF4Q8IZF3 695 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 MAFAQ8NHW3 353 aaPredicted RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 NOC4LQ9BVI4 516 aaKnown RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 WNT8AQ9H1J5 351 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 CXXC1Q9P0U4 656 aaPredicted RBP22.51■■□□□ 1.19
CPSF7-204ENST00000413232 COL20A1Q9P218 1284 aa22.51■■□□□ 1.19
CPSF7-204ENST00000413232 HIP1O00291 1037 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 ARIH2O95376 493 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 PDE4DQ08499 809 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 ALDH8A1Q9H2A2 487 aaPredicted RBP22.5■■□□□ 1.19
CPSF7-204ENST00000413232 KAT14Q9H8E8 782 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 IL23AQ9NPF7 189 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 PNMA2Q9UL42 364 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 SUPT16HQ9Y5B9 1047 aaKnown RBP22.5■■□□□ 1.19
CPSF7-204ENST00000413232 TNKSO95271 1327 aa22.5■■□□□ 1.19
CPSF7-204ENST00000413232 TET1Q8NFU7 2136 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 CHD7Q9P2D1 2997 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 TMEM265A0A087WTH1 108 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 IMMTQ16891 758 aaKnown RBP22.49■■□□□ 1.19
CPSF7-204ENST00000413232 DNERQ8NFT8 737 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 OR6J1Q8NGC5 347 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 PBX4Q9BYU1 374 aa22.49■■□□□ 1.19
CPSF7-204ENST00000413232 TRMT13Q9NUP7 481 aaKnown RBP22.49■■□□□ 1.19
CPSF7-204ENST00000413232 MYL3P08590 195 aa22.48■■□□□ 1.19
CPSF7-204ENST00000413232 QRICH1Q2TAL8 776 aa22.48■■□□□ 1.19
CPSF7-204ENST00000413232 CCDC178Q5BJE1 867 aa22.48■■□□□ 1.19
CPSF7-204ENST00000413232 CYB5R4Q7L1T6 521 aa22.48■■□□□ 1.19
CPSF7-204ENST00000413232 STAG2Q8N3U4 1231 aa22.48■■□□□ 1.19
CPSF7-204ENST00000413232 RGS22Q8NE09 1264 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms