RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 ALDH5A1P51649 535 aaPredicted RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 FBXO16Q8IX29 292 aaPredicted RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 SRBD1Q8N5C6 995 aaKnown RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 FERMT2Q96AC1 680 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 HTATIP2Q9BUP3 242 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 SENP6Q9GZR1 1112 aaPredicted RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 ABHD16BQ9H3Z7 469 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 XPNPEP3Q9NQH7 507 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 COL20A1Q9P218 1284 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 FAM184BQ9ULE4 1060 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 NAP1L2Q9ULW6 460 aaPredicted RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 H0YGN5 161 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 CFBP00751 764 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 COL6A1P12109 1028 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 KIF5BP33176 963 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 ADCYAP1R1P41586 468 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 ATN1P54259 1190 aaPredicted RBP15.25■□□□□ 0.03
SSB-203ENST00000413002 FGD1P98174 961 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 LRRC41Q15345 812 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 APOA5Q6Q788 366 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 Q6ZUG5 572 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 NOL8Q76FK4 1167 aaKnown RBP15.25■□□□□ 0.03
SSB-203ENST00000413002 SGMS1Q86VZ5 419 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 FANCBQ8NB91 859 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 SYTL5Q8TDW5 730 aaPredicted RBP15.25■□□□□ 0.03
SSB-203ENST00000413002 TAAR1Q96RJ0 339 aa15.25■□□□□ 0.03
SSB-203ENST00000413002 MRPL11Q9Y3B7 192 aaKnown RBP15.25■□□□□ 0.03
SSB-203ENST00000413002 PNMA6FA0A0J9YX94 578 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 KLF18A0A0U1RQI7 1052 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 MYADML2A6NDP7 307 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 EVI5O60447 810 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 CAPN2P17655 700 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 CASTP20810 708 aaKnown RBP15.24■□□□□ 0.03
SSB-203ENST00000413002 HOXA13P31271 388 aaPredicted RBP15.24■□□□□ 0.03
SSB-203ENST00000413002 APOBRQ0VD83 1088 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 LRRC26Q2I0M4 334 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 BLOC1S2Q6QNY1 142 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 ARRDC4Q8NCT1 418 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 MAP3K14Q99558 947 aa15.24■□□□□ 0.03
SSB-203ENST00000413002 ADD3Q9UEY8 706 aaKnown RBP15.24■□□□□ 0.03
SSB-203ENST00000413002 BAZ2BQ9UIF8 2168 aaKnown RBP15.24■□□□□ 0.03
SSB-203ENST00000413002 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 KBTBD13C9JR72 458 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 DNM1LO00429 736 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 HMGB1P09429 215 aaKnown RBP15.23■□□□□ 0.03
SSB-203ENST00000413002 CALM1P0DP23 149 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 CALM2P0DP24 149 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 CALM3P0DP25 149 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 TNFAIP2Q03169 654 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
SSB-203ENST00000413002 TAPT1Q6NXT6 567 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 MCF2L2Q86YR7 1114 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 C7orf61Q8IZ16 206 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 BRF1Q92994 677 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 RRP36Q96EU6 259 aaKnown RBP15.23■□□□□ 0.03
SSB-203ENST00000413002 SPZ1Q9BXG8 430 aa15.23■□□□□ 0.03
SSB-203ENST00000413002 MCM3APO60318 1980 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 LCTP09848 1927 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 ZBTB43O43298 467 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 ADAMTS4O75173 837 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 SMPD1P17405 629 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 RPS6KB1P23443 525 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 GNAQP50148 359 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 PDE4DQ08499 809 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 MORC4Q8TE76 937 aa15.22■□□□□ 0.03
SSB-203ENST00000413002 LARP6Q9BRS8 491 aaKnown RBP15.22■□□□□ 0.03
SSB-203ENST00000413002 UPF3BQ9BZI7 483 aaKnown RBP15.22■□□□□ 0.03
SSB-203ENST00000413002 GOLGA8AA7E2F4 631 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 GOLGA8BA8MQT2 603 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 DUSP11O75319 330 aaKnown RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 SEC24BO95487 1268 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 C6orf222P0C671 652 aaPredicted RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 CDC27P30260 824 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 BEX3Q00994 111 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 RTN1Q16799 776 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 RNF180Q86T96 592 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 FCHSD1Q86WN1 690 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 DNERQ8NFT8 737 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 ZFP91Q96JP5 570 aaPredicted RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 RMDN3Q96TC7 470 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 LZTS2Q9BRK4 669 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 SEC63Q9UGP8 760 aaKnown RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 ZMYND8Q9ULU4 1186 aaPredicted RBP15.21■□□□□ 0.03
SSB-203ENST00000413002 FRMPD3Q5JV73 1810 aa15.21■□□□□ 0.03
SSB-203ENST00000413002 CEP290O15078 2479 aa15.21■□□□□ 0.02
SSB-203ENST00000413002 DYNC1LI2O43237 492 aaPredicted RBP15.2■□□□□ 0.02
SSB-203ENST00000413002 PPFIA3O75145 1194 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 SYN1P17600 705 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 EDNRBP24530 442 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 PSMA5P28066 241 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 ADD1P35611 737 aaKnown RBP15.2■□□□□ 0.02
SSB-203ENST00000413002 HSD17B4P51659 736 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 KCNA10Q16322 511 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 ARHGEF16Q5VV41 709 aa15.2■□□□□ 0.02
SSB-203ENST00000413002 GPKOWQ92917 476 aaPredicted RBP eCLIP15.2■□□□□ 0.021e-13■■□□□ 13
SSB-203ENST00000413002 VTA1Q9NP79 307 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms