RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 HERVK_113Q902F9 699 aa21.95■■□□□ 1.1
ITGA6-204ENST00000412899 GAS2L1Q99501 681 aaPredicted RBP21.95■■□□□ 1.1
ITGA6-204ENST00000412899 TRPV6Q9H1D0 765 aa21.95■■□□□ 1.1
ITGA6-204ENST00000412899 MSRAQ9UJ68 235 aa21.95■■□□□ 1.1
ITGA6-204ENST00000412899 UMODL1Q5DID0 1318 aa21.95■■□□□ 1.1
ITGA6-204ENST00000412899 UNC80Q8N2C7 3258 aa21.94■■□□□ 1.1
ITGA6-204ENST00000412899 B4GALT4O60513 344 aa21.94■■□□□ 1.1
ITGA6-204ENST00000412899 HSPD1P10809 573 aaKnown RBP21.94■■□□□ 1.1
ITGA6-204ENST00000412899 RAB30Q15771 203 aa21.94■■□□□ 1.1
ITGA6-204ENST00000412899 DUSP28Q4G0W2 176 aa21.94■■□□□ 1.1
ITGA6-204ENST00000412899 SYMPKQ92797 1274 aaKnown RBP21.94■■□□□ 1.1
ITGA6-204ENST00000412899 WDR11Q9BZH6 1224 aa21.94■■□□□ 1.1
ITGA6-204ENST00000412899 LOC102724159A0A0B4J2E5 919 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 TRIM6-TRIM34B2RNG4 842 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 CALML3P27482 149 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 HAND2P61296 217 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 PWP2Q15269 919 aaKnown RBP21.93■■□□□ 1.1
ITGA6-204ENST00000412899 OTOP2Q7RTS6 562 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 NOC4LQ9BVI4 516 aaKnown RBP21.93■■□□□ 1.1
ITGA6-204ENST00000412899 PRDM12Q9H4Q4 367 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 POLR3EQ9NVU0 708 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 CXXC1Q9P0U4 656 aaPredicted RBP21.93■■□□□ 1.1
ITGA6-204ENST00000412899 PNMA2Q9UL42 364 aa21.93■■□□□ 1.1
ITGA6-204ENST00000412899 CUL9Q8IWT3 2517 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 PDHBP11177 359 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 NMIQ13287 307 aaPredicted RBP21.92■■□□□ 1.1
ITGA6-204ENST00000412899 RNF207Q6ZRF8 634 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 MFSD6Q6ZSS7 791 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 ZNF589Q86UQ0 364 aaPredicted RBP21.92■■□□□ 1.1
ITGA6-204ENST00000412899 TICAM2Q86XR7 235 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 PLEKHM2Q8IWE5 1019 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 USP38Q8NB14 1042 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 PPM1EQ8WY54 764 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 TTC14Q96N46 770 aa21.92■■□□□ 1.1
ITGA6-204ENST00000412899 MPHOSPH6Q99547 160 aaKnown RBP21.92■■□□□ 1.1
ITGA6-204ENST00000412899 GPHNQ9NQX3 736 aaPredicted RBP21.92■■□□□ 1.1
ITGA6-204ENST00000412899 ZMYM6O95789 1325 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 CPT1AP50416 773 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 AKNAD1Q5T1N1 836 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 SLC30A10Q6XR72 485 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 RPUSD2Q8IZ73 545 aaKnown RBP21.91■■□□□ 1.1
ITGA6-204ENST00000412899 RILPL2Q969X0 211 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 WNT8AQ9H1J5 351 aa21.91■■□□□ 1.1
ITGA6-204ENST00000412899 ALDH8A1Q9H2A2 487 aaPredicted RBP21.91■■□□□ 1.1
ITGA6-204ENST00000412899 LCTP09848 1927 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 CCDC171Q6TFL3 1326 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 MYL3P08590 195 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 SUPT20HL2P0C7V6 817 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 PCP11498 1178 aaKnown RBP21.9■■□□□ 1.1
ITGA6-204ENST00000412899 PDE4DQ08499 809 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 ZNF543Q08ER8 600 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 OR6J1Q8NGC5 347 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 CLEC4DQ8WXI8 215 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 NKX2-4Q9H2Z4 354 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 SLC28A3Q9HAS3 691 aa21.9■■□□□ 1.1
ITGA6-204ENST00000412899 RBM47A0AV96 593 aaKnown RBP21.89■■□□□ 1.09
ITGA6-204ENST00000412899 PURAQ00577 322 aaKnown RBP21.89■■□□□ 1.09
ITGA6-204ENST00000412899 BRDTQ58F21 947 aaPredicted RBP21.89■■□□□ 1.09
ITGA6-204ENST00000412899 SCLYQ96I15 445 aa21.89■■□□□ 1.09
ITGA6-204ENST00000412899 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.09
ITGA6-204ENST00000412899 RNF41Q9H4P4 317 aaPredicted RBP21.89■■□□□ 1.09
ITGA6-204ENST00000412899 WDR19Q8NEZ3 1342 aa21.88■■□□□ 1.09
ITGA6-204ENST00000412899 MFAP1P55081 439 aaKnown RBP21.88■■□□□ 1.09
ITGA6-204ENST00000412899 RPS6P62753 249 aaKnown RBP21.88■■□□□ 1.09
ITGA6-204ENST00000412899 PPP2R5BQ15173 497 aa21.88■■□□□ 1.09
ITGA6-204ENST00000412899 TJAP1Q5JTD0 557 aa21.88■■□□□ 1.09
ITGA6-204ENST00000412899 ESR2Q92731 530 aa21.88■■□□□ 1.09
ITGA6-204ENST00000412899 MTG1Q9BT17 334 aaPredicted RBP21.88■■□□□ 1.09
ITGA6-204ENST00000412899 TRMT13Q9NUP7 481 aaKnown RBP21.88■■□□□ 1.09
ITGA6-204ENST00000412899 SLC4A7Q9Y6M7 1214 aa21.88■■□□□ 1.09
ITGA6-204ENST00000412899 TNKSO95271 1327 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 RAD50Q92878 1312 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 ZBBXA8MT70 800 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 B4DLN1 442 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 NKRFO15226 690 aaKnown RBP eCLIP21.87■■□□□ 1.09
ITGA6-204ENST00000412899 SNHG28P0DPA3 235 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 CYP2C9P11712 490 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 IGFBP4P22692 258 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 MRPL12P52815 198 aaKnown RBP21.87■■□□□ 1.09
ITGA6-204ENST00000412899 FAM47CQ5HY64 1035 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 TBC1D10CQ8IV04 446 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 DNERQ8NFT8 737 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 ZKSCAN3Q9BRR0 538 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 PRDM6Q9NQX0 595 aa21.87■■□□□ 1.09
ITGA6-204ENST00000412899 YBX2Q9Y2T7 364 aaKnown RBP21.87■■□□□ 1.09
ITGA6-204ENST00000412899 GOLGA8HP0CJ92 632 aa21.86■■□□□ 1.09
ITGA6-204ENST00000412899 USH1GQ495M9 461 aa21.86■■□□□ 1.09
ITGA6-204ENST00000412899 GPATCH4Q5T3I0 446 aaKnown RBP21.86■■□□□ 1.09
ITGA6-204ENST00000412899 SCFD2Q8WU76 684 aa21.86■■□□□ 1.09
ITGA6-204ENST00000412899 CDH23Q9H251 3354 aa21.86■■□□□ 1.09
ITGA6-204ENST00000412899 EYSQ5T1H1 3165 aa21.86■■□□□ 1.09
ITGA6-204ENST00000412899 ZNF213O14771 459 aa21.85■■□□□ 1.09
ITGA6-204ENST00000412899 PFKMP08237 780 aa21.85■■□□□ 1.09
ITGA6-204ENST00000412899 SDSP20132 328 aa21.85■■□□□ 1.09
ITGA6-204ENST00000412899 RABGGTBP53611 331 aa21.85■■□□□ 1.09
ITGA6-204ENST00000412899 UBA5Q9GZZ9 404 aa21.85■■□□□ 1.09
ITGA6-204ENST00000412899 NEDD4P46934 1319 aa21.84■■□□□ 1.09
ITGA6-204ENST00000412899 KPNA6O60684 536 aa21.84■■□□□ 1.09
ITGA6-204ENST00000412899 TXNP10599 105 aaKnown RBP21.84■■□□□ 1.09
ITGA6-204ENST00000412899 EDNRBP24530 442 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms