RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 EZH2Q15910 746 aaKnown RBP12.4□□□□□ -0.42
PTPRF-204ENST00000412568 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 FAM83BQ5T0W9 1011 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 COL23A1Q86Y22 540 aaPredicted RBP12.4□□□□□ -0.42
PTPRF-204ENST00000412568 SULF1Q8IWU6 871 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 TRIML1Q8N9V2 468 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 PIM2Q9P1W9 311 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 FLT1P17948 1338 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 SHTN1A0MZ66 631 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 IKBKBO14920 756 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 MCM3P25205 808 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 MAGEA1P43355 309 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 FOXP4Q8IVH2 680 aaPredicted RBP12.4□□□□□ -0.42
PTPRF-204ENST00000412568 MPHOSPH6Q99547 160 aaKnown RBP12.4□□□□□ -0.42
PTPRF-204ENST00000412568 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 ATP6V0A2Q9Y487 856 aa12.4□□□□□ -0.42
PTPRF-204ENST00000412568 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.43
PTPRF-204ENST00000412568 RESP18Q5W5W9 173 aa12.4□□□□□ -0.43
PTPRF-204ENST00000412568 TMTC1Q8IUR5 882 aa12.4□□□□□ -0.43
PTPRF-204ENST00000412568 KCNB2Q92953 911 aa12.4□□□□□ -0.43
PTPRF-204ENST00000412568 PPP2R2CQ9Y2T4 447 aa12.4□□□□□ -0.43
PTPRF-204ENST00000412568 KRT5P13647 590 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 CTNNA2P26232 953 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 GLG1Q92896 1179 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 CCDC127Q96BQ5 260 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 ZNF512BQ96KM6 892 aaPredicted RBP12.39□□□□□ -0.43
PTPRF-204ENST00000412568 OGFRQ9NZT2 677 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 PNMA6FA0A0J9YX94 578 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 TRIM49BA6NDI0 452 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 TDP2O95551 362 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 CDC25BP30305 580 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 SMTNP53814 917 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 ST3GAL1Q11201 340 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 FAM102BQ5T8I3 360 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 NCAPG2Q86XI2 1143 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 FAM178BQ8IXR5 827 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 NEDD1Q8NHV4 660 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 GDAP1L1Q96MZ0 367 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 FNBP1Q96RU3 617 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 CLIC2O15247 247 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 COPB1P53618 953 aaKnown RBP12.39□□□□□ -0.43
PTPRF-204ENST00000412568 IFFO1Q0D2I5 559 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 ADAM9Q13443 819 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 OR8K1Q8NGG5 319 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 JAKMIP2Q96AA8 810 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 SYNCQ9H7C4 482 aa12.39□□□□□ -0.43
PTPRF-204ENST00000412568 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 RTKN2Q8IZC4 609 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 PIGOQ8TEQ8 1089 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 IFT81Q8WYA0 676 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 SUGCTQ9HAC7 445 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ORC4O43929 436 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 CETN2P41208 172 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
PTPRF-204ENST00000412568 TMEM179Q6ZVK1 233 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 POTEDQ86YR6 584 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ZNF526Q8TF50 670 aaPredicted RBP12.38□□□□□ -0.43
PTPRF-204ENST00000412568 CNOT6LQ96LI5 555 aaKnown RBP12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ANO3Q9BYT9 981 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 CCDC172P0C7W6 258 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 NFIAQ12857 509 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 QRICH1Q2TAL8 776 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 KMT5BQ4FZB7 885 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ODR4Q5SWX8 454 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 USP37Q86T82 979 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ADGRF4Q8IZF3 695 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 CRAMP1Q96RY5 1269 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 ZNF577Q9BSK1 485 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 IFT172Q9UG01 1749 aa12.38□□□□□ -0.43
PTPRF-204ENST00000412568 RASA1P20936 1047 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 PPP1R2P41236 205 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 CDC42EP5Q6NZY7 148 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 PLCD3Q8N3E9 789 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 PPP1R13BQ96KQ4 1090 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 NAPGQ99747 312 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 LSM14BQ9BX40 385 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 DISC1Q9NRI5 854 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RABGAP1Q9Y3P9 1069 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 IVNS1ABPQ9Y6Y0 642 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 CALUO43852 315 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 HPS3Q969F9 1004 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 HOOK2Q96ED9 719 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 ARMCX3Q9UH62 379 aaPredicted RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RSPH14Q9UHP6 348 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 TNS2Q63HR2 1409 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 POLR2FP61218 127 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RBL2Q08999 1139 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 TRIM14Q14142 442 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
PTPRF-204ENST00000412568 RIOK1Q9BRS2 568 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms