RNA–Protein interactions for RNA: ENST00000412252.5

SHANK2-205, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,376 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-205ENST00000412252 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.19
SHANK2-205ENST00000412252 LOC102724159A0A0B4J2E5 919 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 SNAI1O95863 264 aaPredicted RBP13.83□□□□□ -0.2
SHANK2-205ENST00000412252 MYCP01106 439 aaPredicted RBP13.83□□□□□ -0.2
SHANK2-205ENST00000412252 HSD17B4P51659 736 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 NEK4P51957 841 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 AK2P54819 239 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 PWP2Q15269 919 aaKnown RBP13.83□□□□□ -0.2
SHANK2-205ENST00000412252 ANKRD1Q15327 319 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 LARP6Q9BRS8 491 aaKnown RBP13.83□□□□□ -0.2
SHANK2-205ENST00000412252 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.83□□□□□ -0.23e-6■■■■□ 22.6
SHANK2-205ENST00000412252 RNF208Q9H0X6 261 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 COL20A1Q9P218 1284 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 TPCN1Q9ULQ1 816 aa13.83□□□□□ -0.2
SHANK2-205ENST00000412252 PTPDC1A2A3K4 754 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 ZNF865P0CJ78 1059 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 IFNAR1P17181 557 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 CCND3P30281 292 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 GJA8P48165 433 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 CCT2P78371 535 aaKnown RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 PRAMEF19Q5SWL8 479 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 LHX8Q68G74 356 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 SYTL5Q8TDW5 730 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 CRISPLD2Q9H0B8 497 aa13.82□□□□□ -0.2
SHANK2-205ENST00000412252 NCOA5Q9HCD5 579 aaKnown RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 SEC63Q9UGP8 760 aaKnown RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 NAP1L2Q9ULW6 460 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 V9GY48 417 aaPredicted RBP13.82□□□□□ -0.2
SHANK2-205ENST00000412252 SMCHD1A6NHR9 2005 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 hCG_1642624A0A1W2PR95 340 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 ASB14A6NK59 587 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 PRPF3O43395 683 aaKnown RBP13.81□□□□□ -0.2
SHANK2-205ENST00000412252 PFKFB2O60825 505 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 SGPL1O95470 568 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 CAPN2P17655 700 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 EDNRBP24530 442 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 CALML3P27482 149 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 ALDH5A1P51649 535 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-205ENST00000412252 SOX10P56693 466 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 DNERQ8NFT8 737 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 TBC1D32Q96NH3 1257 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
SHANK2-205ENST00000412252 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
SHANK2-205ENST00000412252 ADD3Q9UEY8 706 aaKnown RBP13.81□□□□□ -0.2
SHANK2-205ENST00000412252 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
SHANK2-205ENST00000412252 PIK3CDO00329 1044 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 SEPT4O43236 478 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 CFBP00751 764 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 SCRN1Q12765 414 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 PKN1Q16512 942 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 WWC2Q6AWC2 1192 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 TYW1BQ6NUM6 668 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 U2AF1L4Q8WU68 220 aaKnown RBP13.8□□□□□ -0.2
SHANK2-205ENST00000412252 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 DEFB118Q96PH6 123 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 RNF26Q9BY78 433 aaPredicted RBP13.8□□□□□ -0.2
SHANK2-205ENST00000412252 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
SHANK2-205ENST00000412252 UPF2Q9HAU5 1272 aaKnown RBP13.8□□□□□ -0.2
SHANK2-205ENST00000412252 KIAA0100Q14667 2235 aaKnown RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 hCG_1984214I3L0E3 225 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 MEIS2O14770 477 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 EN2P19622 333 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 ACVR2BQ13705 512 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 ME3Q16798 604 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 PFKFB3Q16875 520 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 TEX2Q8IWB9 1127 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 ZNF713Q8N859 430 aaPredicted RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 PHKBQ93100 1093 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 BARHL2Q9NY43 387 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 DDX20Q9UHI6 824 aaKnown RBP13.79□□□□□ -0.2
SHANK2-205ENST00000412252 OGDHLQ9ULD0 1010 aa13.79□□□□□ -0.2
SHANK2-205ENST00000412252 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-205ENST00000412252 STXBP3O00186 592 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 MSCO60682 206 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 LARGE1O95461 756 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 POLR2MP0CAP2 368 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 HOXA13P31271 388 aaPredicted RBP13.78□□□□□ -0.2
SHANK2-205ENST00000412252 STK3Q13188 491 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 RABEP1Q15276 862 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 TAPT1Q6NXT6 567 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 PPP1R18Q6NYC8 613 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 UBE2Q1Q7Z7E8 422 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
SHANK2-205ENST00000412252 IWS1Q96ST2 819 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 CNPY2Q9Y2B0 182 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
SHANK2-205ENST00000412252 LCTP09848 1927 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 PDE4DIPQ5VU43 2346 aa13.78□□□□□ -0.2
SHANK2-205ENST00000412252 RBBP6Q7Z6E9 1792 aaKnown RBP13.77□□□□□ -0.2
SHANK2-205ENST00000412252 PLXNA1Q9UIW2 1896 aa13.77□□□□□ -0.2
SHANK2-205ENST00000412252 SCG2P13521 617 aa13.77□□□□□ -0.21
SHANK2-205ENST00000412252 MNX1P50219 401 aaPredicted RBP13.77□□□□□ -0.21
SHANK2-205ENST00000412252 HEATR3Q7Z4Q2 680 aa13.77□□□□□ -0.21
SHANK2-205ENST00000412252 NSUN6Q8TEA1 469 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms