RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 SHC4Q6S5L8 630 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 ERO1BQ86YB8 467 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 FMR1NBQ8N0W7 255 aaPredicted RBP13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 EHMT1Q9H9B1 1298 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 ELP3Q9H9T3 547 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 CCPG1Q9ULG6 757 aa13.2□□□□□ -0.3
SNRNP35-202ENST00000412157 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 VWA3AA6NCI4 1184 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 NEMFO60524 1076 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 OR52Z1P0C646 297 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 GCFC2P16383 781 aaKnown RBP13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 TXLNAP40222 546 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 PRPHP41219 470 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 MAP2K1Q02750 393 aaPredicted RBP13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 PPATQ06203 517 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 CAMK4Q16566 473 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 ABHD8Q96I13 439 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 HPSEQ9Y251 543 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 MRVI1Q9Y6F6 885 aa13.19□□□□□ -0.3
SNRNP35-202ENST00000412157 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 SPDYE5A6NIY4 337 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 GCOM1H8Y6P7 765 aaPredicted RBP13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 MEIS2O14770 477 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 ZNF202O95125 648 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 POLR2MP0CAP2 368 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 SNW1Q13573 536 aaKnown RBP13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 DTHD1Q6ZMT9 781 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 OTUD5Q96G74 571 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 CCDC34Q96HJ3 373 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 TIGD1Q96MW7 591 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 PYM1Q9BRP8 204 aaKnown RBP13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 SLC38A10Q9HBR0 1119 aa13.18□□□□□ -0.3
SNRNP35-202ENST00000412157 CXCL11O14625 94 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 CFBP00751 764 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 CCDC192P0DO97 292 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 ALAS1P13196 640 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 DSG3P32926 999 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 LONP1P36776 959 aaKnown RBP13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 GRIN1Q05586 938 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 PPIL2Q13356 520 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 COG2Q14746 738 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 CALCRLQ16602 461 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 SPECC1Q5M775 1068 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 GADL1Q6ZQY3 521 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 ATG4CQ96DT6 458 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 RAVER2Q9HCJ3 691 aaKnown RBP13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 HOOK1Q9UJC3 728 aaKnown RBP13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
SNRNP35-202ENST00000412157 ZNF536O15090 1300 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 FSD2A1L4K1 749 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 UNCXA6NJT0 531 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 MARCH6O60337 910 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 TDP2O95551 362 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 USP11P51784 963 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 OAZ1P54368 228 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 PPP4R3AQ6IN85 833 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 CATSPERGQ6ZRH7 1159 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 RBM43Q6ZSC3 357 aaKnown RBP13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 CKAP2LQ8IYA6 745 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 SAMD3Q8N6K7 520 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 C4orf32Q8N8J7 132 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 PROCA1Q8NCQ7 364 aaPredicted RBP13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 DDX25Q9UHL0 483 aaKnown RBP13.16□□□□□ -0.3
SNRNP35-202ENST00000412157 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 VWA5AO00534 786 aa13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 OPLAHO14841 1288 aa13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 HOXA13P31271 388 aaPredicted RBP13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 SREBF1P36956 1147 aa13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 MRE11P49959 708 aa13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 FKBP1BP68106 108 aa13.15□□□□□ -0.3
SNRNP35-202ENST00000412157 ARHGAP4P98171 946 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms