RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 ZNF200P98182 395 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-205ENST00000411993 ARID5AQ03989 594 aa7.56□□□□□ -1.2
HDAC9-205ENST00000411993 CPNE8Q86YQ8 564 aa7.56□□□□□ -1.2
HDAC9-205ENST00000411993 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
HDAC9-205ENST00000411993 NLGN2Q8NFZ4 835 aa7.56□□□□□ -1.2
HDAC9-205ENST00000411993 PRKAG3Q9UGI9 489 aa7.56□□□□□ -1.2
HDAC9-205ENST00000411993 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
HDAC9-205ENST00000411993 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
HDAC9-205ENST00000411993 NCKAP1LP55160 1127 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 SCRN1Q12765 414 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 FAM178BQ8IXR5 827 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 LZTR1Q8N653 840 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 PANK1Q8TE04 598 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
HDAC9-205ENST00000411993 B2RBV5 119 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 IRS4O14654 1257 aaPredicted RBP7.54□□□□□ -1.2
HDAC9-205ENST00000411993 DDAH1O94760 285 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 PFKLP17858 780 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 DNAJA1P31689 397 aaKnown RBP7.54□□□□□ -1.2
HDAC9-205ENST00000411993 ETFBP38117 255 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 AFF3P51826 1226 aaKnown RBP7.54□□□□□ -1.2
HDAC9-205ENST00000411993 FXNQ16595 210 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 SV2CQ496J9 727 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 GTF2IRD2BQ6EKJ0 949 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 GTF2IRD2Q86UP8 949 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 IGDCC3Q8IVU1 814 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 TRIM59Q8IWR1 403 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 CLEC1BQ9P126 229 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 GULP1Q9UBP9 304 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 R3HCC1Q9Y3T6 440 aaKnown RBP7.54□□□□□ -1.2
HDAC9-205ENST00000411993 PCDHA5Q9Y5H7 936 aa7.54□□□□□ -1.2
HDAC9-205ENST00000411993 ZC3H12DA2A288 527 aaKnown RBP7.53□□□□□ -1.2
HDAC9-205ENST00000411993 NPHS1O60500 1241 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 BUB1BO60566 1050 aaPredicted RBP7.53□□□□□ -1.2
HDAC9-205ENST00000411993 FGRP09769 529 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 RBM10P98175 930 aaKnown RBP7.53□□□□□ -1.2
HDAC9-205ENST00000411993 CNKSR3Q6P9H4 555 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 USP33Q8TEY7 942 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 LGR4Q9BXB1 951 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 HCFC2Q9Y5Z7 792 aa7.53□□□□□ -1.2
HDAC9-205ENST00000411993 GLI4P10075 376 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 PLS3P13797 630 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 BMP7P18075 431 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 PRR5P85299 388 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 TARBP2Q15633 366 aaKnown RBP7.52□□□□□ -1.21
HDAC9-205ENST00000411993 TMEFF1Q8IYR6 380 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 COPS5Q92905 334 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 MRGPRX3Q96LB0 322 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 ZNF408Q9H9D4 720 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 GPRC5CQ9NQ84 441 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 NUDT5Q9UKK9 219 aa7.52□□□□□ -1.21
HDAC9-205ENST00000411993 SUSD5O60279 629 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 THBDP07204 575 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 INHBBP09529 407 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 FAM129CQ86XR2 697 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 BTN2A2Q8WVV5 523 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 ALG3Q92685 438 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 DACT3Q96B18 629 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-205ENST00000411993 NKX2-4Q9H2Z4 354 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 RXFP1Q9HBX9 757 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 EPB41L4AQ9HCS5 686 aaPredicted RBP7.51□□□□□ -1.21
HDAC9-205ENST00000411993 CYP26B1Q9NR63 512 aa7.51□□□□□ -1.21
HDAC9-205ENST00000411993 C7orf72A4D263 438 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 ZNF227Q86WZ6 799 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 MCF2L2Q86YR7 1114 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 NETO2Q8NC67 525 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 PEX11GQ96HA9 241 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 PWWP2AQ96N64 755 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 MMP19Q99542 508 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 ZCCHC4Q9H5U6 513 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 FBLN5Q9UBX5 448 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 FAN1Q9Y2M0 1017 aa7.5□□□□□ -1.21
HDAC9-205ENST00000411993 FUCA1P04066 466 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 ITGAVP06756 1048 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 SNRPB2P08579 225 aaKnown RBP7.49□□□□□ -1.21
HDAC9-205ENST00000411993 LIMS1P48059 325 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 WWC2Q6AWC2 1192 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 TTLL10Q6ZVT0 673 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 MTA3Q9BTC8 594 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 BTG4Q9NY30 223 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC9-205ENST00000411993 IRS2Q9Y4H2 1338 aa7.49□□□□□ -1.21
HDAC9-205ENST00000411993 TBX1O43435 398 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 ECI1P42126 302 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 VMACQ2NL98 169 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 MBLAC2Q68D91 279 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 EEPD1Q7L9B9 569 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 NLGN1Q8N2Q7 840 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 TSPAN17Q96FV3 270 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 RNF38Q9H0F5 515 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 PODXL2Q9NZ53 605 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 MARCH2Q9P0N8 246 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 PLA2G2DQ9UNK4 145 aa7.48□□□□□ -1.21
HDAC9-205ENST00000411993 E9PSI1 815 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 AGRPO00253 132 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 PPP1R11O60927 126 aaPredicted RBP7.47□□□□□ -1.21
HDAC9-205ENST00000411993 GJB6O95452 261 aa7.47□□□□□ -1.21
HDAC9-205ENST00000411993 NCAM1P13591 858 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms