RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 TMEM240Q5SV17 173 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 TICAM2Q86XR7 235 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 TBC1D5Q92609 795 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 VWCEQ96DN2 955 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 UBA5Q9GZZ9 404 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 SPC25Q9HBM1 224 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 MYO9BQ13459 2157 aa19.42■□□□□ 0.7
SCAMP4-203ENST00000411971 SCN10AQ9Y5Y9 1956 aa19.41■□□□□ 0.7
SCAMP4-203ENST00000411971 IQSEC1Q6DN90 963 aa19.41■□□□□ 0.7
SCAMP4-203ENST00000411971 KIAA1211Q6ZU35 1233 aa19.41■□□□□ 0.7
SCAMP4-203ENST00000411971 TRPV6Q9H1D0 765 aa19.41■□□□□ 0.7
SCAMP4-203ENST00000411971 CHD7Q9P2D1 2997 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 SPTBN5Q9NRC6 3674 aaKnown RBP19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 PTPDC1A2A3K4 754 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 B4E1Z4 1266 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 KDM4AO75164 1064 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 CALML3P27482 149 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 PBX2P40425 430 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 ITGA7Q13683 1181 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 TTC14Q96N46 770 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 VTA1Q9NP79 307 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 MROH7Q68CQ1 1323 aa19.4■□□□□ 0.7
SCAMP4-203ENST00000411971 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.7
SCAMP4-203ENST00000411971 RBM47A0AV96 593 aaKnown RBP19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 B4GALT4O60513 344 aa19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 RPS6P62753 249 aaKnown RBP19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 DUSP28Q4G0W2 176 aa19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 ZNF365Q70YC5 407 aa19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 COPS5Q92905 334 aa19.39■□□□□ 0.69
SCAMP4-203ENST00000411971 ZNF213O14771 459 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 GSPT1P15170 499 aaKnown RBP19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 EDNRBP24530 442 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 DNAJB2P25686 324 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 AAMPQ13685 434 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 GRIN2CQ14957 1233 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 USH1GQ495M9 461 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 ENAHQ8N8S7 591 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 WDR19Q8NEZ3 1342 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 ESR2Q92731 530 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 WDR11Q9BZH6 1224 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 AP5M1Q9H0R1 490 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 WNT8AQ9H1J5 351 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 CXXC1Q9P0U4 656 aaPredicted RBP19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 ZSWIM5Q9P217 1185 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 COL20A1Q9P218 1284 aa19.38■□□□□ 0.69
SCAMP4-203ENST00000411971 ARIH2O95376 493 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 PCP11498 1178 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 RNF207Q6ZRF8 634 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 PNMA1Q8ND90 353 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 ANKS1AQ92625 1134 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 NOC4LQ9BVI4 516 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 DIAPH3Q9NSV4 1193 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 Q9Y3F1 56 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 BAZ2BQ9UIF8 2168 aaKnown RBP19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 REV3LO60673 3130 aa19.37■□□□□ 0.69
SCAMP4-203ENST00000411971 TET1Q8NFU7 2136 aa19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 TRIP12Q14669 1992 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 CCL23P55773 120 aa19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 PURAQ00577 322 aaKnown RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 PPIGQ13427 754 aaKnown RBP eCLIP19.36■□□□□ 0.695e-11■□□□□ 9.3
SCAMP4-203ENST00000411971 DGKHQ86XP1 1220 aa19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 DSCC1Q9BVC3 393 aa19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 COL25A1Q9BXS0 654 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 RNF41Q9H4P4 317 aaPredicted RBP19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 TAF6LQ9Y6J9 622 aa19.36■□□□□ 0.69
SCAMP4-203ENST00000411971 MYH7BA7E2Y1 1941 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 CDC37Q16543 378 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 SLC35G1Q2M3R5 365 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 ADGRF4Q8IZF3 695 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 USP38Q8NB14 1042 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 MAFAQ8NHW3 353 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 ZSCAN10Q96SZ4 725 aaPredicted RBP19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 PBX4Q9BYU1 374 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 HIPK3Q9H422 1215 aa19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 TRMT13Q9NUP7 481 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 ADD3Q9UEY8 706 aaKnown RBP19.35■□□□□ 0.69
SCAMP4-203ENST00000411971 TNKSO95271 1327 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 TLR3O15455 904 aaKnown RBP19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 CABYRO75952 493 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 CYP2C9P11712 490 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 MFAP1P55081 439 aaKnown RBP19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 CYB5R4Q7L1T6 521 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 STAG2Q8N3U4 1231 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 TMEM199Q8N511 208 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 SCLYQ96I15 445 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 TAAR1Q96RJ0 339 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 ALDH8A1Q9H2A2 487 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 IL23AQ9NPF7 189 aa19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 SUPT16HQ9Y5B9 1047 aaKnown RBP19.34■□□□□ 0.69
SCAMP4-203ENST00000411971 PTPRSQ13332 1948 aa19.33■□□□□ 0.69
SCAMP4-203ENST00000411971 OPLAHO14841 1288 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 MYL3P08590 195 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 QRICH1Q2TAL8 776 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 GPATCH4Q5T3I0 446 aaKnown RBP19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 OR6J1Q8NGC5 347 aa19.33■□□□□ 0.68
SCAMP4-203ENST00000411971 JMJD4Q9H9V9 463 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms