RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 KCNA1Q09470 495 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 SLC9A5Q14940 896 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 SEZ6Q53EL9 994 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 LIMS2Q7Z4I7 341 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 Q8N1X5 172 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 DDX11Q96FC9 970 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 TSPAN17Q96FV3 270 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 PEX11GQ96HA9 241 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 VPS11Q9H270 941 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 MRS2Q9HD23 443 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 VTI1BQ9UEU0 232 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 TSC22D4Q9Y3Q8 395 aa4.45□□□□□ -1.7
HMGB3P2-201ENST00000411913 MROH6A6NGR9 719 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 SORBS3O60504 671 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 CYP2C8P10632 490 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 EIF4A3P38919 411 aaKnown RBP4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 TRIM26Q12899 539 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 CRIP3Q6Q6R5 217 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 LZTR1Q8N653 840 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 BRF1Q92994 677 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 CDK5RAP1Q96SZ6 601 aaKnown RBP4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 SLC9A7Q96T83 725 aa4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 SRRTQ9BXP5 876 aaKnown RBP4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 SUCOQ9UBS9 1254 aaKnown RBP4.44□□□□□ -1.7
HMGB3P2-201ENST00000411913 C9IYK1 514 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 TNFRSF10CO14798 259 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 GREM1O60565 184 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZBTB7AO95365 584 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 CD3EP07766 207 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 CRKP46108 304 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 MCTP2Q6DN12 878 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 REXO1Q8N1G1 1221 aaKnown RBP4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 USP33Q8TEY7 942 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 FCRL3Q96P31 734 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 COPRSQ9NQ92 184 aa4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 SF3B6Q9Y3B4 125 aaKnown RBP4.43□□□□□ -1.7
HMGB3P2-201ENST00000411913 SHOXO15266 292 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 AMHP03971 560 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 IFNGR1P15260 489 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 RPL13P26373 211 aaKnown RBP4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZNF165P49910 485 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZNF445P59923 1031 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 POU4F1Q01851 419 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 FAM26FQ5R3K3 315 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 TDRD10Q5VZ19 366 aaKnown RBP4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 FIBCD1Q8N539 461 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 LINC00482Q8N8I6 264 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 NETO2Q8NC67 525 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZNF296Q8WUU4 475 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZNF747Q9BV97 191 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 SSBP3Q9BWW4 388 aaPredicted RBP4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 PCDH18Q9HCL0 1135 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 RWDD3Q9Y3V2 267 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 HS3ST3A1Q9Y663 406 aa4.42□□□□□ -1.7
HMGB3P2-201ENST00000411913 APOBRQ0VD83 1088 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 SURF1Q15526 300 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 DCAF15Q66K64 600 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 ZDHHC15Q96MV8 337 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 GORASP1Q9BQQ3 440 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 C11orf84Q9BUA3 381 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 KLC2Q9H0B6 622 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 PCED1AQ9H1Q7 454 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 DEF6Q9H4E7 631 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 GP6Q9HCN6 339 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 KCNQ5Q9NR82 932 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 UBP1Q9NZI7 540 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 FHOD1Q9Y613 1164 aa4.41□□□□□ -1.7
HMGB3P2-201ENST00000411913 NPEPPSL1A6NEC2 478 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 MEIS3P2A8K0S8 358 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 LAMTOR5O43504 91 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 TP53P04637 393 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 ITGA4P13612 1032 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 THBS2P35442 1172 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 ITGAEP38570 1179 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 PMS1P54277 932 aaKnown RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 ICAM4Q14773 271 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 CDSNQ15517 529 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 ANKRD39Q53RE8 183 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 INTS3Q68E01 1043 aaKnown RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 ERMP1Q7Z2K6 904 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 PALM2Q8IXS6 379 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 KYQ8NBH2 561 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 LCORQ96JN0 433 aaPredicted RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 NOL6Q9H6R4 1146 aaKnown RBP4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 FAM86C1Q9NVL1 165 aa4.4□□□□□ -1.71
HMGB3P2-201ENST00000411913 DDX3XO00571 662 aaKnown RBP eCLIP4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 C8BP07358 591 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 AXDND1Q5T1B0 1012 aaPredicted RBP4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 C9orf131Q5VYM1 1079 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 EEF1DP3Q658K8 133 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 PLEKHH3Q7Z736 793 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 TTLL6Q8N841 843 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 TXNDC5Q8NBS9 432 aaKnown RBP4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 NKD1Q969G9 470 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 GULP1Q9UBP9 304 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 FBLN5Q9UBX5 448 aa4.39□□□□□ -1.71
HMGB3P2-201ENST00000411913 CD247P20963 164 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 KLF10Q13118 480 aa4.38□□□□□ -1.71
HMGB3P2-201ENST00000411913 PPP2R5DQ14738 602 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms