RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
MCF2L-210ENST00000409954 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
MCF2L-210ENST00000409954 CD4P01730 458 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 ITGA7Q13683 1181 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 CXCL17Q6UXB2 119 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 FAM126BQ8IXS8 530 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 PNMA1Q8ND90 353 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 ZKSCAN3Q9BRR0 538 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 WDR11Q9BZH6 1224 aa17■□□□□ 0.31
MCF2L-210ENST00000409954 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 NKRFO15226 690 aaKnown RBP eCLIP16.99■□□□□ 0.31
MCF2L-210ENST00000409954 CALML3P27482 149 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 EPHB4P54760 987 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
MCF2L-210ENST00000409954 ASPRV1Q53RT3 343 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 BRDTQ58F21 947 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-210ENST00000409954 FBXO16Q8IX29 292 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-210ENST00000409954 RUFY2Q8WXA3 655 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 PURBQ96QR8 312 aaKnown RBP16.99■□□□□ 0.31
MCF2L-210ENST00000409954 UBA5Q9GZZ9 404 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
MCF2L-210ENST00000409954 NEDD4P46934 1319 aa16.98■□□□□ 0.31
MCF2L-210ENST00000409954 B4E1Z4 1266 aa16.98■□□□□ 0.31
MCF2L-210ENST00000409954 PDE4DQ08499 809 aa16.98■□□□□ 0.31
MCF2L-210ENST00000409954 MCF2L2Q86YR7 1114 aa16.98■□□□□ 0.31
MCF2L-210ENST00000409954 LAMA3Q16787 3333 aa16.98■□□□□ 0.31
MCF2L-210ENST00000409954 KPNA6O60684 536 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 SUPT20HL2P0C7V6 817 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 GOLGA8HP0CJ92 632 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 CPT1AP50416 773 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 ADGRF4Q8IZF3 695 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 FAM161BQ96MY7 647 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
MCF2L-210ENST00000409954 GPHNQ9NQX3 736 aaPredicted RBP16.97■□□□□ 0.31
MCF2L-210ENST00000409954 ABCB11O95342 1321 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 DLL1O00548 723 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 PARP1P09874 1014 aaKnown RBP16.96■□□□□ 0.31
MCF2L-210ENST00000409954 EDNRBP24530 442 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 TRDNQ13061 729 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 TMEM240Q5SV17 173 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 C16orf59Q7L2K0 433 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 ENAHQ8N8S7 591 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-210ENST00000409954 SCFD2Q8WU76 684 aa16.96■□□□□ 0.31
MCF2L-210ENST00000409954 CDX2Q99626 313 aaPredicted RBP16.96■□□□□ 0.31
MCF2L-210ENST00000409954 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.96■□□□□ 0.314e-6■■□□□ 14.4
MCF2L-210ENST00000409954 MRPL11Q9Y3B7 192 aaKnown RBP16.96■□□□□ 0.31
MCF2L-210ENST00000409954 DDX49Q9Y6V7 483 aaKnown RBP16.96■□□□□ 0.31
MCF2L-210ENST00000409954 GRIN2DO15399 1336 aa16.96■□□□□ 0.3
MCF2L-210ENST00000409954 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 CSF2RAP15509 400 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 USH1GQ495M9 461 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 TMEM63BQ5T3F8 832 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 IFIT1BQ5T764 474 aaKnown RBP16.95■□□□□ 0.3
MCF2L-210ENST00000409954 TTC22Q5TAA0 569 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 PSRC1Q6PGN9 363 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-210ENST00000409954 SLC30A10Q6XR72 485 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 RPUSD2Q8IZ73 545 aaKnown RBP16.95■□□□□ 0.3
MCF2L-210ENST00000409954 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 HIPK3Q9H422 1215 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
MCF2L-210ENST00000409954 TNKSO95271 1327 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 RAD50Q92878 1312 aa16.95■□□□□ 0.3
MCF2L-210ENST00000409954 FGBP02675 491 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 TXNP10599 105 aaKnown RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 TRAF1Q13077 416 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 TTLL4Q14679 1199 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 PPP2R5BQ15173 497 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 CDC37Q16543 378 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 ZNF365Q70YC5 407 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 FBXO11Q86XK2 927 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 OR6J1Q8NGC5 347 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 NSUN6Q8TEA1 469 aaKnown RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 MTG1Q9BT17 334 aaPredicted RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 PPP1R12CQ9BZL4 782 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 MTIF3Q9H2K0 278 aaKnown RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 VAT1LQ9HCJ6 419 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 IL23AQ9NPF7 189 aa16.94■□□□□ 0.3
MCF2L-210ENST00000409954 MAP3K20Q9NYL2 800 aaKnown RBP16.94■□□□□ 0.3
MCF2L-210ENST00000409954 A6NJR5 290 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 DHX16O60231 1041 aaKnown RBP16.93■□□□□ 0.3
MCF2L-210ENST00000409954 PDE4AP27815 886 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 CYP2C18P33260 490 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 PURAQ00577 322 aaKnown RBP16.93■□□□□ 0.3
MCF2L-210ENST00000409954 STXBP2Q15833 593 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 RASIP1Q5U651 963 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 SAMD3Q8N6K7 520 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 TRPV6Q9H1D0 765 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 ALDH8A1Q9H2A2 487 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-210ENST00000409954 TTYH1Q9H313 450 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-210ENST00000409954 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 JMJD4Q9H9V9 463 aa16.93■□□□□ 0.3
MCF2L-210ENST00000409954 LTBP2Q14767 1821 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 KLRF2D3W0D1 207 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 B4GALT4O60513 344 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 MYL3P08590 195 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 CHMLP26374 656 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 PSMC6P62333 389 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 QRICH1Q2TAL8 776 aa16.92■□□□□ 0.3
MCF2L-210ENST00000409954 SYTL5Q8TDW5 730 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms