RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.62□□□□□ -0.39
CHMP3-205ENST00000409810 MAP3K20Q9NYL2 800 aaKnown RBP12.62□□□□□ -0.39
CHMP3-205ENST00000409810 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
CHMP3-205ENST00000409810 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
CHMP3-205ENST00000409810 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 NID2Q14112 1375 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 AKR1A1P14550 325 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 ALDH5A1P51649 535 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 CNTN2Q02246 1040 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 MLLT1Q03111 559 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 SLC30A10Q6XR72 485 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 ANKLE1Q8NAG6 615 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 SHISA4Q96DD7 197 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 FGD4Q96M96 766 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 UPF3BQ9BZI7 483 aaKnown RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
CHMP3-205ENST00000409810 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
CHMP3-205ENST00000409810 SOWAHBA6NEL2 793 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 PPP1R11O60927 126 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-205ENST00000409810 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
CHMP3-205ENST00000409810 CFBP00751 764 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 EVCP57679 992 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 ANKRD1Q15327 319 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 PRAMEF19Q5SWL8 479 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 TRPV1Q8NER1 839 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 IL17RAQ96F46 866 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 RBM27Q9P2N5 1060 aaKnown RBP12.6□□□□□ -0.39
CHMP3-205ENST00000409810 OGDHLQ9ULD0 1010 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 KIAA1217Q5T5P2 1943 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
CHMP3-205ENST00000409810 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 hCG_1984214I3L0E3 225 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 SNAI1O95863 264 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 POLR2MP0CAP2 368 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 ZNF865P0CJ78 1059 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 RARBP10826 455 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 GHRHRQ02643 423 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 ACVR2BQ13705 512 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 SYTL5Q8TDW5 730 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-205ENST00000409810 MORC4Q8TE76 937 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 CUL5Q93034 780 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 VTA1Q9NP79 307 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 FAM184BQ9ULE4 1060 aa12.59□□□□□ -0.39
CHMP3-205ENST00000409810 SEC24BO95487 1268 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 CDC27P30260 824 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 HSD17B4P51659 736 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 AKAP17AQ02040 695 aaKnown RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 PDE4DQ08499 809 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 ARHGEF16Q5VV41 709 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 CPLX2Q6PUV4 134 aaKnown RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 ARRDC4Q8NCT1 418 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 NSUN6Q8TEA1 469 aaKnown RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 ZNF274Q96GC6 653 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 IWS1Q96ST2 819 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 RMDN3Q96TC7 470 aa12.58□□□□□ -0.4
CHMP3-205ENST00000409810 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-205ENST00000409810 CPLX1O14810 134 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 PDIA3P30101 505 aaKnown RBP12.57□□□□□ -0.4
CHMP3-205ENST00000409810 LHX8Q68G74 356 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 NECAB2Q7Z6G3 386 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 TEX2Q8IWB9 1127 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 SMARCC2Q8TAQ2 1214 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 PURBQ96QR8 312 aaKnown RBP12.57□□□□□ -0.4
CHMP3-205ENST00000409810 SPC25Q9HBM1 224 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 FAM217BQ9NTX9 383 aaPredicted RBP12.57□□□□□ -0.4
CHMP3-205ENST00000409810 ASTN1O14525 1302 aa12.57□□□□□ -0.4
CHMP3-205ENST00000409810 KBTBD13C9JR72 458 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 DNM1LO00429 736 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 OPLAHO14841 1288 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 DUSP11O75319 330 aaKnown RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 EDNRBP24530 442 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 ADD1P35611 737 aaKnown RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 FUT2Q10981 343 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 ANO1Q5XXA6 986 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 RNF180Q86T96 592 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 FBXO16Q8IX29 292 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 TRIM22Q8IYM9 498 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 TBC1D5Q92609 795 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 TAAR1Q96RJ0 339 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 HTATIP2Q9BUP3 242 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 C22orf23Q9BZE7 217 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 KATNBL1Q9H079 304 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 GLT8D2Q9H1C3 349 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 SLKQ9H2G2 1235 aaPredicted RBP12.56□□□□□ -0.4
CHMP3-205ENST00000409810 PSTPIP2Q9H939 334 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 XPNPEP3Q9NQH7 507 aa12.56□□□□□ -0.4
CHMP3-205ENST00000409810 PXMP2Q9NR77 195 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms