RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 JDP2Q8WYK2 163 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 VPS39Q96JC1 886 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 JPH2Q9BR39 696 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 OSBPL10Q9BXB5 764 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 AP1M1Q9BXS5 423 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 UPF3AQ9H1J1 476 aaKnown RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 AASDHPPTQ9NRN7 309 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 CUEDC1Q9NWM3 386 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 TUBA8Q9NY65 449 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 EPS15L1Q9UBC2 864 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 ARHGAP26Q9UNA1 814 aa4.47□□□□□ -1.69
RGPD1-202ENST00000409776 PCYT1BQ9Y5K3 369 aaPredicted RBP4.47□□□□□ -1.69
RGPD1-202ENST00000409776 KPNA3O00505 521 aaPredicted RBP4.46□□□□□ -1.69
RGPD1-202ENST00000409776 SEMA3EO15041 775 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 ADCY5O95622 1261 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 SLC3A2P08195 630 aaKnown RBP4.46□□□□□ -1.69
RGPD1-202ENST00000409776 TERF2Q15554 542 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 CNSTQ6PJW8 725 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 LVRNQ6Q4G3 990 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 SKAP1Q86WV1 359 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 HPS1Q92902 700 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 APOL2Q9BQE5 337 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 ACTR5Q9H9F9 607 aaPredicted RBP4.46□□□□□ -1.69
RGPD1-202ENST00000409776 KLHL14Q9P2G3 628 aa4.46□□□□□ -1.69
RGPD1-202ENST00000409776 FAM170AA1A519 330 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 RAB19A4D1S5 217 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC151A5D8V7 595 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 BUB1O43683 1085 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PHACTR2O75167 634 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 CLTBP09497 229 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PYGMP11217 842 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MYCLP12524 364 aaPredicted RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 RAB4AP20338 218 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 NUP107P57740 925 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 STK4Q13043 487 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 HAUS3Q68CZ6 603 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ABRAXAS1Q6UWZ7 409 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TRIM42Q8IWZ5 723 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PDCD6IPQ8WUM4 868 aaKnown RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 EIF3CQ99613 913 aaKnown RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PRPF18Q99633 342 aaKnown RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 LOC105371045A0A1W2PR82 267 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 H3BM21 787 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 GIPC1O14908 333 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 CHUKO15111 745 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MUSKO15146 869 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MAP3K7O43318 606 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SUPT3HO75486 399 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TOMM70O94826 608 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SNX4O95219 450 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 GSNP06396 782 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC166P0CW27 439 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PAMP19021 973 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ITGAXP20702 1163 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 IST1P53990 364 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 DEFA1P59665 94 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 DEFA3P59666 94 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MDM2Q00987 491 aaPredicted RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SF3A3Q12874 501 aaKnown RBP eCLIP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MTA1Q13330 715 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 DGKKQ5KSL6 1271 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SRGAP1Q7Z6B7 1085 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 WDR48Q8TAF3 677 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SH3TC2Q8TF17 1288 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 CCDC51Q96ER9 411 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TRIM62Q9BVG3 475 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 KLHL25Q9H0H3 589 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ST7Q9NRC1 585 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 POLR3EQ9NVU0 708 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TRMT1Q9NXH9 659 aaKnown RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 EHD3Q9NZN3 535 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MAPK8IP1Q9UQF2 711 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ZKSCAN5Q9Y2L8 839 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MYO15BQ96JP2 1530 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TARSL2A2RTX5 802 aaKnown RBP4.46□□□□□ -1.7
RGPD1-202ENST00000409776 SNPHO15079 494 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 B3GALNT1O75752 331 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PET100P0DJ07 73 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ELF1P32519 619 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 KRT85P78386 507 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ICA1Q05084 483 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 RAB32Q13637 225 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 MYBPC2Q14324 1141 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 DMC1Q14565 340 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 COG2Q14746 738 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 PPP2R5BQ15173 497 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 FAM81BQ96LP2 452 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 RBBP8Q99708 897 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 TMEM165Q9HC07 324 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ASAP1Q9ULH1 1129 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 M0QZ92 97 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 DLGAP3O95886 979 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 KRT19P08727 400 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 IL1R1P14778 569 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 STX2P32856 288 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 GABPAQ06546 454 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 LAMB3Q13751 1172 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 E2F4Q16254 413 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 GNPTABQ3T906 1256 aa4.46□□□□□ -1.7
RGPD1-202ENST00000409776 ARHGAP22Q7Z5H3 698 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms