RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ZSWIM6Q9HCJ5 1215 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 ADD3Q9UEY8 706 aaKnown RBP36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 ZHX1Q9UKY1 873 aaPredicted RBP36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 PCDHA1Q9Y5I3 950 aa36.13■■■■□ 3.37
TRAF3IP1-203ENST00000409739 OPLAHO14841 1288 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 ALDH5A1P51649 535 aaPredicted RBP36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 ACVR2BQ13705 512 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 MCF2L2Q86YR7 1114 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 TBC1D5Q92609 795 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 BRF1Q92994 677 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 AGXT2Q9BYV1 514 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 KATNBL1Q9H079 304 aa36.12■■■■□ 3.37
TRAF3IP1-203ENST00000409739 APOBRQ0VD83 1088 aa36.11■■■■□ 3.37
TRAF3IP1-203ENST00000409739 RUFY3Q7L099 469 aa36.11■■■■□ 3.37
TRAF3IP1-203ENST00000409739 RRP36Q96EU6 259 aaKnown RBP36.11■■■■□ 3.37
TRAF3IP1-203ENST00000409739 TM6SF1Q9BZW5 370 aa36.11■■■■□ 3.37
TRAF3IP1-203ENST00000409739 AKR1A1P14550 325 aa36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 RCAN1P53805 252 aa36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 RTN1Q16799 776 aa36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 MORC4Q8TE76 937 aa36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 PAWRQ96IZ0 340 aaKnown RBP36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 RBM28Q9NW13 759 aaKnown RBP36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 KIAA1217Q5T5P2 1943 aa36.1■■■■□ 3.37
TRAF3IP1-203ENST00000409739 GOLGA8AA7E2F4 631 aa36.09■■■■□ 3.37
TRAF3IP1-203ENST00000409739 GOLGA8BA8MQT2 603 aa36.09■■■■□ 3.37
TRAF3IP1-203ENST00000409739 EIF5BO60841 1220 aaKnown RBP36.09■■■■□ 3.37
TRAF3IP1-203ENST00000409739 TRAF1Q13077 416 aa36.09■■■■□ 3.37
TRAF3IP1-203ENST00000409739 LOC102724159A0A0B4J2E5 919 aa36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 SEC24BO95487 1268 aa36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 PWP2Q15269 919 aaKnown RBP36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 SYTL5Q8TDW5 730 aaPredicted RBP36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 LENG1Q96BZ8 264 aaPredicted RBP36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 COL20A1Q9P218 1284 aa36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 SEC63Q9UGP8 760 aaKnown RBP36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 NAP1L2Q9ULW6 460 aaPredicted RBP36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 CYP46A1Q9Y6A2 500 aa36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 CNTNAP5Q8WYK1 1306 aa36.08■■■■□ 3.37
TRAF3IP1-203ENST00000409739 GHRHRQ02643 423 aa36.07■■■■□ 3.36
TRAF3IP1-203ENST00000409739 NECAB2Q7Z6G3 386 aa36.07■■■■□ 3.36
TRAF3IP1-203ENST00000409739 DNERQ8NFT8 737 aa36.07■■■■□ 3.36
TRAF3IP1-203ENST00000409739 UPF3BQ9BZI7 483 aaKnown RBP36.07■■■■□ 3.36
TRAF3IP1-203ENST00000409739 FAM184BQ9ULE4 1060 aa36.07■■■■□ 3.36
TRAF3IP1-203ENST00000409739 NID2Q14112 1375 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 CFBP00751 764 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 RARBP10826 455 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 HSD17B4P51659 736 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 CCDC144BQ3MJ40 725 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 CCDC82Q8N4S0 544 aa36.06■■■■□ 3.36
TRAF3IP1-203ENST00000409739 ADCY6O43306 1168 aa36.05■■■■□ 3.36
TRAF3IP1-203ENST00000409739 ANAPC15P60006 121 aa36.05■■■■□ 3.36
TRAF3IP1-203ENST00000409739 C8orf34Q49A92 452 aa36.05■■■■□ 3.36
TRAF3IP1-203ENST00000409739 FAM217BQ9NTX9 383 aaPredicted RBP36.05■■■■□ 3.36
TRAF3IP1-203ENST00000409739 CDC27P30260 824 aa36.04■■■■□ 3.36
TRAF3IP1-203ENST00000409739 FBXO16Q8IX29 292 aaPredicted RBP36.04■■■■□ 3.36
TRAF3IP1-203ENST00000409739 XPNPEP3Q9NQH7 507 aa36.04■■■■□ 3.36
TRAF3IP1-203ENST00000409739 EDNRBP24530 442 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 METAP2P50579 478 aaKnown RBP eCLIP36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 FUT2Q10981 343 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 TOB2Q14106 344 aaPredicted RBP36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 EEPD1Q7L9B9 569 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 TAAR1Q96RJ0 339 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 C11orf49Q9H6J7 331 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 VTA1Q9NP79 307 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 DNAH12Q6ZR08 3092 aa36.03■■■■□ 3.36
TRAF3IP1-203ENST00000409739 hCG_1642624A0A1W2PR95 340 aa36.02■■■■□ 3.36
TRAF3IP1-203ENST00000409739 DNM1LO00429 736 aa36.02■■■■□ 3.36
TRAF3IP1-203ENST00000409739 COL6A1P12109 1028 aa36.02■■■■□ 3.36
TRAF3IP1-203ENST00000409739 ARRDC4Q8NCT1 418 aa36.02■■■■□ 3.36
TRAF3IP1-203ENST00000409739 EVCP57679 992 aa36.01■■■■□ 3.36
TRAF3IP1-203ENST00000409739 GJC2Q5T442 439 aaPredicted RBP36.01■■■■□ 3.36
TRAF3IP1-203ENST00000409739 SAMD3Q8N6K7 520 aa36.01■■■■□ 3.36
TRAF3IP1-203ENST00000409739 MPHOSPH6Q99547 160 aaKnown RBP36.01■■■■□ 3.36
TRAF3IP1-203ENST00000409739 MAP3K20Q9NYL2 800 aaKnown RBP36.01■■■■□ 3.36
TRAF3IP1-203ENST00000409739 PGK1P00558 417 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 HOXA13P31271 388 aaPredicted RBP36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 LRRC41Q15345 812 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 TAPT1Q6NXT6 567 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 IL17RAQ96F46 866 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 HTATIP2Q9BUP3 242 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PDGFCQ9NRA1 345 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 SYNRGQ9UMZ2 1314 aa36■■■■□ 3.35
TRAF3IP1-203ENST00000409739 C11orf97A0A1B0GVM6 126 aaPredicted RBP35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 DUSP11O75319 330 aaKnown RBP35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 ADCYAP1R1P41586 468 aa35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PDE4DQ08499 809 aa35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PPP2R5BQ15173 497 aa35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 NSUN6Q8TEA1 469 aaKnown RBP35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 RMDN3Q96TC7 470 aa35.99■■■■□ 3.35
TRAF3IP1-203ENST00000409739 ADAMTS4O75173 837 aa35.98■■■■□ 3.35
TRAF3IP1-203ENST00000409739 MYCNP04198 464 aaPredicted RBP35.98■■■■□ 3.35
TRAF3IP1-203ENST00000409739 ADD1P35611 737 aaKnown RBP35.98■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PDRG1Q9NUG6 133 aa35.98■■■■□ 3.35
TRAF3IP1-203ENST00000409739 CCDC196A0A1B0GTZ2 297 aa35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 B4DLN1 442 aa35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 KBTBD13C9JR72 458 aa35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 GCOM1H8Y6P7 765 aaPredicted RBP35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 POLR2MP0CAP2 368 aa35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 MRPL12P52815 198 aaKnown RBP35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 PXMP2Q9NR77 195 aa35.97■■■■□ 3.35
TRAF3IP1-203ENST00000409739 TNFAIP2Q03169 654 aa35.96■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms