RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 STAG1Q8WVM7 1258 aa14.98□□□□□ -0.01
CHRNA1-205ENST00000409542 ISY1Q9ULR0 285 aaKnown RBP14.98□□□□□ -0.01
CHRNA1-205ENST00000409542 NCOR1O75376 2440 aa14.98□□□□□ -0.01
CHRNA1-205ENST00000409542 SCN5AQ14524 2016 aa14.98□□□□□ -0.01
CHRNA1-205ENST00000409542 PLIN4Q96Q06 1357 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 ASB14A6NK59 587 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 RBAK-RBAKDNI3L0D1 243 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 CDC45O75419 566 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 APPP05067 770 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 TSPY3P0CV98 308 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 TSPY8P0CW00 308 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 CYP2C9P11712 490 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 KCNQ1P51787 676 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 STAT2P52630 851 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 PPP2R2DQ66LE6 453 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 PLEKHM2Q8IWE5 1019 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 SNX21Q969T3 373 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 AP5M1Q9H0R1 490 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 MTIF3Q9H2K0 278 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 TRMT13Q9NUP7 481 aaKnown RBP14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 CYP39A1Q9NYL5 469 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 SYNPO2Q9UMS6 1093 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 SLC4A7Q9Y6M7 1214 aa14.97□□□□□ -0.01
CHRNA1-205ENST00000409542 EPOPA6NHQ4 379 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 ZBBXA8MT70 800 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 ARHGEF15O94989 841 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 FDX1P10109 184 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 KRT40Q6A162 431 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 IQSEC1Q6DN90 963 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 CHURC1Q8WUH1 139 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 GMCL1Q96IK5 515 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 ALDH8A1Q9H2A2 487 aaPredicted RBP14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 CERS4Q9HA82 394 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 IL17RBQ9NRM6 502 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 PCDHA11Q9Y5I1 949 aa14.96□□□□□ -0.01
CHRNA1-205ENST00000409542 NMT2O60551 498 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 SLC1A4P43007 532 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 IKQ13123 557 aaPredicted RBP14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 TKFCQ3LXA3 575 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 KIAA1211Q6ZU35 1233 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 DEFB128Q7Z7B8 93 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 FAM160B2Q86V87 743 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 RPUSD2Q8IZ73 545 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 PRR12Q9ULL5 1215 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 Q9Y3F1 56 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 PRRC2BQ5JSZ5 2229 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 FOXP2O15409 715 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 ZEB2O60315 1214 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 ATP2A2P16615 1042 aaKnown RBP14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 GNAT2P19087 354 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 PPARAQ07869 468 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 RCSD1Q6JBY9 416 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 NSMFQ6X4W1 530 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 MORC4Q8TE76 937 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 MTMR7Q9Y216 660 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 MTCH2Q9Y6C9 303 aa14.95□□□□□ -0.02
CHRNA1-205ENST00000409542 PLA2G6O60733 806 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 CA3P07451 260 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 GSPT1P15170 499 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 PLA2G5P39877 138 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 CTDSPL2Q05D32 466 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 TTBK2Q6IQ55 1244 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 SPRED2Q7Z698 418 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 IL27Q8NEV9 243 aa14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHRNA1-205ENST00000409542 ZFYP08048 801 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 PURAQ00577 322 aaKnown RBP14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 PDE4BQ07343 736 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 BAATQ14032 418 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 DUSP28Q4G0W2 176 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 SEZ6LQ9BYH1 1024 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 SLKQ9H2G2 1235 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 VTA1Q9NP79 307 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 CCPG1Q9ULG6 757 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 STX8Q9UNK0 236 aa14.93□□□□□ -0.02
CHRNA1-205ENST00000409542 TNKSO95271 1327 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 MYL3P08590 195 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 SLC16A2P36021 539 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 ALDH5A1P51649 535 aaPredicted RBP14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 SKIV2LQ15477 1246 aaKnown RBP14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 TMEM67Q5HYA8 995 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 WDR11Q9BZH6 1224 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 EPHX3Q9H6B9 360 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 TET1Q8NFU7 2136 aa14.92□□□□□ -0.02
CHRNA1-205ENST00000409542 NFIBO00712 420 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 ERC2O15083 957 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 POU3F3P20264 500 aaPredicted RBP14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 GSE1Q14687 1217 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 NBPF20Q3BBV1 942 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 OTUD7AQ8TE49 926 aaPredicted RBP14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 COPS5Q92905 334 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 NAPBQ9H115 298 aa14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 RANBP17Q9H2T7 1088 aaKnown RBP14.91□□□□□ -0.02
CHRNA1-205ENST00000409542 SCN10AQ9Y5Y9 1956 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms