RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 PNMA2Q9UL42 364 aa19.23■□□□□ 0.67
SSB-202ENST00000409333 GOLGA6L22H0YM25 854 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 PRPF40AO75400 957 aaKnown RBP19.22■□□□□ 0.67
SSB-202ENST00000409333 NASPP49321 788 aaPredicted RBP19.22■□□□□ 0.67
SSB-202ENST00000409333 TTC38Q5R3I4 469 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 TMEM87AQ8NBN3 555 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 TBCKQ8TEA7 893 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 HHIPL1Q96JK4 782 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 LMBRD1Q9NUN5 540 aa19.22■□□□□ 0.67
SSB-202ENST00000409333 MANSC4A6NHS7 340 aaPredicted RBP19.21■□□□□ 0.67
SSB-202ENST00000409333 DDX11L8A8MPP1 907 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 GCOM1H8Y6P7 765 aaPredicted RBP19.21■□□□□ 0.67
SSB-202ENST00000409333 POLR2MP0CAP2 368 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 AP3B2Q13367 1082 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 PAXIP1Q6ZW49 1069 aaPredicted RBP19.21■□□□□ 0.67
SSB-202ENST00000409333 ANO3Q9BYT9 981 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 RBPJLQ9UBG7 517 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 IGF2BP3O00425 579 aaKnown RBP eCLIP19.21■□□□□ 0.67
SSB-202ENST00000409333 TRAPPC10P48553 1259 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 HSD17B4P51659 736 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 GRM1Q13255 1194 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 PTPAQ15257 358 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 LINC00301Q8NCQ3 95 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 SMCR8Q8TEV9 937 aaPredicted RBP19.21■□□□□ 0.67
SSB-202ENST00000409333 CCDC102AQ96A19 550 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 SPATC1LQ9H0A9 340 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 RCOR1Q9UKL0 485 aa19.21■□□□□ 0.67
SSB-202ENST00000409333 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
SSB-202ENST00000409333 STK38Q15208 465 aa19.2■□□□□ 0.66
SSB-202ENST00000409333 CYP4F22Q6NT55 531 aa19.2■□□□□ 0.66
SSB-202ENST00000409333 FCHSD1Q86WN1 690 aa19.2■□□□□ 0.66
SSB-202ENST00000409333 MCF2L2Q86YR7 1114 aa19.2■□□□□ 0.66
SSB-202ENST00000409333 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.2■□□□□ 0.66
SSB-202ENST00000409333 ELP1O95163 1332 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 SPDYE3A6NKU9 549 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 EDIL3O43854 480 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 YEATS4O95619 227 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 APLP1P51693 650 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 GHRHRQ02643 423 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 ZNF174Q15697 407 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 NEK8Q86SG6 692 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 RIOX2Q8IUF8 465 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 COL20A1Q9P218 1284 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 RABGAP1Q9Y3P9 1069 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 KIAA1217Q5T5P2 1943 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 GADD45BO75293 160 aaPredicted RBP19.19■□□□□ 0.66
SSB-202ENST00000409333 FOSP01100 380 aaPredicted RBP19.19■□□□□ 0.66
SSB-202ENST00000409333 SLC39A14Q15043 492 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 CSPP1Q1MSJ5 1256 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 LETM2Q2VYF4 491 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 Q3C1V9 767 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 TKFCQ3LXA3 575 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 TPRNQ4KMQ1 711 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 NSMFQ6X4W1 530 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 SLC30A10Q6XR72 485 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 TEX2Q8IWB9 1127 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 MOV10L1Q9BXT6 1211 aaKnown RBP19.19■□□□□ 0.66
SSB-202ENST00000409333 R3HDMLQ9H3Y0 253 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 CREBZFQ9NS37 354 aa19.19■□□□□ 0.66
SSB-202ENST00000409333 MCM7P33993 719 aa19.18■□□□□ 0.66
SSB-202ENST00000409333 RPS6P62753 249 aaKnown RBP19.18■□□□□ 0.66
SSB-202ENST00000409333 PARK7Q99497 189 aaKnown RBP19.18■□□□□ 0.66
SSB-202ENST00000409333 MRVI1Q9Y6F6 885 aa19.18■□□□□ 0.66
SSB-202ENST00000409333 SPTLC2O15270 562 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 MARCKSP29966 332 aaPredicted RBP19.17■□□□□ 0.66
SSB-202ENST00000409333 ERVK-9P63128 1117 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 ERVK-24P63145 666 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 RNF207Q6ZRF8 634 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 CHST13Q8NET6 341 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 GTF3C2Q8WUA4 911 aaPredicted RBP19.17■□□□□ 0.66
SSB-202ENST00000409333 DOCK3Q8IZD9 2030 aa19.17■□□□□ 0.66
SSB-202ENST00000409333 RASSF10A6NK89 507 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 CCNT1O60563 726 aaKnown RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 NCAPG2Q86XI2 1143 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 IFNL1Q8IU54 200 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 ANKRD13CQ8N6S4 541 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 KCNG4Q8TDN1 519 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 SYTL5Q8TDW5 730 aaPredicted RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 CRYGNQ8WXF5 182 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 A1CFQ9NQ94 594 aaKnown RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 MGAMO43451 1857 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 MCM3APO60318 1980 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 TDP2O95551 362 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 ERCC3P19447 782 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 SREBF1P36956 1147 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 BAATQ14032 418 aaPredicted RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 PURBQ96QR8 312 aaKnown RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 MAP3K20Q9NYL2 800 aaKnown RBP19.16■□□□□ 0.66
SSB-202ENST00000409333 CEP131Q9UPN4 1083 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 LRRC37A2A6NM11 1700 aa19.16■□□□□ 0.66
SSB-202ENST00000409333 ME1P48163 572 aa19.15■□□□□ 0.66
SSB-202ENST00000409333 GCLCP48506 637 aaPredicted RBP19.15■□□□□ 0.66
SSB-202ENST00000409333 INHBEP58166 350 aa19.15■□□□□ 0.66
SSB-202ENST00000409333 UBXN2AP68543 259 aa19.15■□□□□ 0.66
SSB-202ENST00000409333 ARHGAP4P98171 946 aa19.15■□□□□ 0.66
SSB-202ENST00000409333 SREBF2Q12772 1141 aa19.15■□□□□ 0.66
SSB-202ENST00000409333 PTGDRQ13258 359 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms