RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 SPZ1Q9BXG8 430 aa20.81■□□□□ 0.92
PDLIM2-206ENST00000409141 DNM1LO00429 736 aa20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 APOA5Q6Q788 366 aa20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 EEPD1Q7L9B9 569 aa20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 BAZ2BQ9UIF8 2168 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-206ENST00000409141 LOC102724159A0A0B4J2E5 919 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 KBTBD13C9JR72 458 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 PLEKHA8P1O95397 391 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 CFBP00751 764 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 COL6A1P12109 1028 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 PWP2Q15269 919 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 CMTR1Q8N1G2 835 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 SRBD1Q8N5C6 995 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 DNERQ8NFT8 737 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 MORC4Q8TE76 937 aa20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 LENG1Q96BZ8 264 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 MPHOSPH6Q99547 160 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 MKI67P46013 3256 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-206ENST00000409141 B4DLN1 442 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 ZBTB43O43298 467 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 PGK1P00558 417 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 MRPL12P52815 198 aaKnown RBP20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 LRRC41Q15345 812 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 Q6ZUG5 572 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 CCDC82Q8N4S0 544 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 SYTL5Q8TDW5 730 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 SENP6Q9GZR1 1112 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 NAP1L2Q9ULW6 460 aaPredicted RBP20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 MYH6P13533 1939 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 MCM3APO60318 1980 aa20.78■□□□□ 0.92
PDLIM2-206ENST00000409141 KLF18A0A0U1RQI7 1052 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 EVI5O60447 810 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 DUSP11O75319 330 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 RPS6KB1P23443 525 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 TNFAIP2Q03169 654 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 PDE4DQ08499 809 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 PRPF38BQ5VTL8 546 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 RNF180Q86T96 592 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 FBXO16Q8IX29 292 aaPredicted RBP20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 TAAR1Q96RJ0 339 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 VTA1Q9NP79 307 aa20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 SEC63Q9UGP8 760 aaKnown RBP20.77■□□□□ 0.92
PDLIM2-206ENST00000409141 OPLAHO14841 1288 aa20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 TMTC3Q6ZXV5 915 aa20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 NOL8Q76FK4 1167 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 PDGFCQ9NRA1 345 aa20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 FRMPD3Q5JV73 1810 aa20.76■□□□□ 0.91
PDLIM2-206ENST00000409141 ADCY6O43306 1168 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 ADCYAP1R1P41586 468 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 APOBRQ0VD83 1088 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 IQSEC1Q6DN90 963 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 TAPT1Q6NXT6 567 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 NSUN6Q8TEA1 469 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 BRF1Q92994 677 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 RMDN3Q96TC7 470 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 MAP3K20Q9NYL2 800 aaKnown RBP20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 COL20A1Q9P218 1284 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 NR2E3Q9Y5X4 410 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 LCTP09848 1927 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 GOLGA8AA7E2F4 631 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 GOLGA8BA8MQT2 603 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 HSD17B4P51659 736 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 RTN1Q16799 776 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 RUFY3Q7L099 469 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 SAMD3Q8N6K7 520 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 SPC25Q9HBM1 224 aa20.75■□□□□ 0.91
PDLIM2-206ENST00000409141 SYNRGQ9UMZ2 1314 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 GCOM1H8Y6P7 765 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 EIF5BO60841 1220 aaKnown RBP20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 ADAMTS4O75173 837 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 POLR2MP0CAP2 368 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 EDNRBP24530 442 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 HOXA13P31271 388 aaPredicted RBP20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 GHRHRQ02643 423 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 ARHGEF16Q5VV41 709 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 FERMT2Q96AC1 680 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 ZSWIM6Q9HCJ5 1215 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 CYP46A1Q9Y6A2 500 aa20.74■□□□□ 0.91
PDLIM2-206ENST00000409141 CEP290O15078 2479 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 hCG_1642624A0A1W2PR95 340 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 H0YGN5 161 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 C6orf222P0C671 652 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 SMPD1P17405 629 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 RCAN1P53805 252 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 ATN1P54259 1190 aaPredicted RBP20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 FBXL16Q8N461 479 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 IWS1Q96ST2 819 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 TM6SF1Q9BZW5 370 aa20.73■□□□□ 0.91
PDLIM2-206ENST00000409141 EIF2AK2P19525 551 aaKnown RBP20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 GJA9P57773 515 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 LRRC26Q2I0M4 334 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 C7orf61Q8IZ16 206 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
PDLIM2-206ENST00000409141 TSEN34Q9BSV6 310 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms