RNA–Protein interactions for RNA: ENST00000407630.1

SSR1P1-201, Transcript of signal sequence receptor subunit 1 pseudogene 1, humanhuman

BASIC

Gene SSR1P1, Length 814 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P1-201ENST00000407630 ARNTLO00327 626 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 ZSCAN20P17040 1043 aaPredicted RBP12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 CTSKP43235 329 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 TESK1Q15569 626 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 ATP13A4Q4VNC1 1196 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 LINC00114Q6XXX2 140 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 NEDD1Q8NHV4 660 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 JPH3Q8WXH2 748 aaPredicted RBP12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 ASCC2Q9H1I8 757 aaPredicted RBP12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 CABP5Q9NP86 173 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 ZKSCAN5Q9Y2L8 839 aa12.65□□□□□ -0.38
SSR1P1-201ENST00000407630 TRAF5O00463 557 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 RFPL1O75677 317 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 LSSP48449 732 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 PTPN21Q16825 1174 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 SGO2Q562F6 1265 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 SEZ6L2Q6UXD5 910 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 MAGEB6Q8N7X4 407 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 PCDH19Q8TAB3 1148 aa12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 ZNF526Q8TF50 670 aaPredicted RBP12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 LUC7LQ9NQ29 371 aaKnown RBP12.64□□□□□ -0.39
SSR1P1-201ENST00000407630 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 K7ESF4 209 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 MSCO60682 206 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 CKMP06732 381 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 SRGAP2CP0DJJ0 459 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 GLB1P16278 677 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 LTBRP36941 435 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 HDAC1Q13547 482 aaPredicted RBP12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 CCDC103Q8IW40 242 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 CBARPQ8N350 705 aaPredicted RBP12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 CELF4Q9BZC1 486 aaKnown RBP12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 EMC7Q9NPA0 242 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 THG1LQ9NWX6 298 aaKnown RBP12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
SSR1P1-201ENST00000407630 CBX7O95931 251 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 IFNGR1P15260 489 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 PAK1Q13153 545 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 TMEM177Q53S58 311 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 E4F1Q66K89 784 aaPredicted RBP12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 PPP4R4Q6NUP7 873 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 LBX2Q6XYB7 198 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 Q6ZS46 218 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 ALG1Q9BT22 464 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 DUSP23Q9BVJ7 150 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 IP6K2Q9UHH9 426 aa12.62□□□□□ -0.39
SSR1P1-201ENST00000407630 SHISA3A0PJX4 238 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 PLS3P13797 630 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 SNRPNP63162 240 aaKnown RBP12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 SFRP5Q5T4F7 317 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 CHTF18Q8WVB6 975 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 FAM46AQ96IP4 442 aaKnown RBP12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 FCRL3Q96P31 734 aaPredicted RBP12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 VTA1Q9NP79 307 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 C1GALT1Q9NS00 363 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 SPTLC3Q9NUV7 552 aa12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
SSR1P1-201ENST00000407630 GNB5O14775 395 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 MYBL2P10244 700 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 LCP1P13796 627 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 SEPHS1P49903 392 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 ERVK-21P61565 698 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 OCRLQ01968 901 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 KCNAB2Q13303 367 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 GFOD2Q3B7J2 385 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 PRRT3Q5FWE3 981 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 SYCP2LQ5T4T6 812 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 C11orf74Q86VG3 221 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 HDAC8Q9BY41 377 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 PRDM5Q9NQX1 630 aaPredicted RBP12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 CLEC1BQ9P126 229 aa12.6□□□□□ -0.39
SSR1P1-201ENST00000407630 ULK1O75385 1050 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 LEFTY1O75610 366 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 ATP2A2P16615 1042 aaKnown RBP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 RXRBP28702 533 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 KIR3DL1P43629 444 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 NOP2P46087 812 aaKnown RBP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 MECP2P51608 486 aaKnown RBP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 GRIK4Q16099 956 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 INAVAQ3KP66 663 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 SLC4A10Q6U841 1118 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 DIO2Q92813 273 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 SLC39A13Q96H72 371 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 UBL7Q96S82 380 aaPredicted RBP12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 COMMD10Q9Y6G5 202 aa12.59□□□□□ -0.39
SSR1P1-201ENST00000407630 KPNA1P52294 538 aaPredicted RBP12.58□□□□□ -0.4
SSR1P1-201ENST00000407630 FAPQ12884 760 aa12.58□□□□□ -0.4
SSR1P1-201ENST00000407630 TCIRG1Q13488 830 aa12.58□□□□□ -0.4
SSR1P1-201ENST00000407630 CLEC16AQ2KHT3 1053 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms