RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 FCER1AP12319 257 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 MCM3P25205 808 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 FIGNQ5HY92 759 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 MAPKAPK5Q8IW41 473 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 ZSCAN29Q8IWY8 852 aaPredicted RBP20.61■□□□□ 0.89
EWSR1-207ENST00000406548 FAM71BQ8TC56 605 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 ERGIC2Q96RQ1 377 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 LACRTQ9GZZ8 138 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 SAP30BPQ9UHR5 308 aaKnown RBP20.61■□□□□ 0.89
EWSR1-207ENST00000406548 A0A1W2PQJ5 194 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 SMCO2A6NFE2 343 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 GNA11P29992 359 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 AMPD3Q01432 767 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 GRIK5Q16478 980 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 COBLL1Q53SF7 1204 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 HSP90B2PQ58FF3 399 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 CNNM4Q6P4Q7 775 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 GOLGA5Q8TBA6 731 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 CCDC102AQ96A19 550 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 ZNF287Q9HBT7 754 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
EWSR1-207ENST00000406548 ANKIB1Q9P2G1 1089 aa20.61■□□□□ 0.89
EWSR1-207ENST00000406548 DDX60LQ5H9U9 1706 aaKnown RBP20.6■□□□□ 0.89
EWSR1-207ENST00000406548 ANO9A1A5B4 782 aa20.6■□□□□ 0.89
EWSR1-207ENST00000406548 TULP2O00295 520 aa20.6■□□□□ 0.89
EWSR1-207ENST00000406548 ZPR1O75312 459 aa20.6■□□□□ 0.89
EWSR1-207ENST00000406548 CDK17Q00537 523 aa20.6■□□□□ 0.89
EWSR1-207ENST00000406548 CAPZA3Q96KX2 299 aa20.6■□□□□ 0.89
EWSR1-207ENST00000406548 PURBQ96QR8 312 aaKnown RBP20.6■□□□□ 0.89
EWSR1-207ENST00000406548 TARSL2A2RTX5 802 aaKnown RBP20.59■□□□□ 0.89
EWSR1-207ENST00000406548 RPS6KA4O75676 772 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 TECP42680 631 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 FKBP15Q5T1M5 1219 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 KIAA0895Q8NCT3 520 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 ZBTB9Q96C00 473 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 MMTAG2Q9BU76 263 aaKnown RBP20.59■□□□□ 0.89
EWSR1-207ENST00000406548 VIPAS39Q9H9C1 493 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 MED4Q9NPJ6 270 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 LDHCP07864 332 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 RAD51AP2Q09MP3 1159 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 MAP9Q49MG5 647 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 IQCDQ96DY2 449 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 RRP36Q96EU6 259 aaKnown RBP20.59■□□□□ 0.89
EWSR1-207ENST00000406548 CALML4Q96GE6 196 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 EYA3Q99504 573 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 LEMD3Q9Y2U8 911 aa20.59■□□□□ 0.89
EWSR1-207ENST00000406548 ACTN2P35609 894 aa20.58■□□□□ 0.89
EWSR1-207ENST00000406548 VAV2P52735 878 aa20.58■□□□□ 0.89
EWSR1-207ENST00000406548 ORC2Q13416 577 aaPredicted RBP20.58■□□□□ 0.89
EWSR1-207ENST00000406548 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
EWSR1-207ENST00000406548 SOGA3Q5TF21 947 aa20.58■□□□□ 0.89
EWSR1-207ENST00000406548 SLC51AQ86UW1 340 aa20.58■□□□□ 0.89
EWSR1-207ENST00000406548 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
EWSR1-207ENST00000406548 TSGA10Q9BZW7 698 aa20.58■□□□□ 0.89
EWSR1-207ENST00000406548 SEC63Q9UGP8 760 aaKnown RBP20.58■□□□□ 0.89
EWSR1-207ENST00000406548 IRX5P78411 483 aaPredicted RBP20.58■□□□□ 0.88
EWSR1-207ENST00000406548 C16orf86Q6ZW13 317 aa20.58■□□□□ 0.88
EWSR1-207ENST00000406548 CAGE1Q8TC20 777 aa20.58■□□□□ 0.88
EWSR1-207ENST00000406548 TBCKQ8TEA7 893 aa20.58■□□□□ 0.88
EWSR1-207ENST00000406548 CWC15Q9P013 229 aaKnown RBP20.58■□□□□ 0.88
EWSR1-207ENST00000406548 GNPATO15228 680 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 IDEP14735 1019 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 CDK8P49336 464 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 CYP27A1Q02318 531 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 KIF5AQ12840 1032 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 USP17L2Q6R6M4 530 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 ZNF804AQ7Z570 1209 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 NEDD1Q8NHV4 660 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 SECISBP2LQ93073 1101 aaKnown RBP20.57■□□□□ 0.88
EWSR1-207ENST00000406548 HPS3Q969F9 1004 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 SEMA6BQ9H3T3 888 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 MACROD2A1Z1Q3 448 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
EWSR1-207ENST00000406548 DUSP10Q9Y6W6 482 aa20.57■□□□□ 0.88
EWSR1-207ENST00000406548 CAPN2P17655 700 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 BTDP43251 543 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 SPA17Q15506 151 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 CENPPQ6IPU0 288 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 LEKR1Q6ZMV7 388 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 REXO1Q8N1G1 1221 aaKnown RBP20.56■□□□□ 0.88
EWSR1-207ENST00000406548 CCDC42Q96M95 316 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 C8orf37Q96NL8 207 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 SLC39A2Q9NP94 309 aa20.56■□□□□ 0.88
EWSR1-207ENST00000406548 ZNF263O14978 683 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 SMARCA1P28370 1054 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 HNRNPH3P31942 346 aaKnown RBP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 TNNT3P45378 269 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 AARSP49588 968 aaKnown RBP eCLIP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 GRAPQ13588 217 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 VPS72Q15906 364 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 SV2BQ7L1I2 683 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 CERS3Q8IU89 383 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 GRAPLQ8TC17 118 aaPredicted RBP20.55■□□□□ 0.88
EWSR1-207ENST00000406548 NGLY1Q96IV0 654 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 PIGSQ96S52 555 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 LRWD1Q9UFC0 647 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 ZNF185O15231 689 aa20.55■□□□□ 0.88
EWSR1-207ENST00000406548 GRB10Q13322 594 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms