RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PHF20Q9BVI0 1012 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 IFT22Q9H7X7 185 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 STOML1Q9UBI4 398 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 APOBEC2Q9Y235 224 aaKnown RBP6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 RAXQ9Y2V3 346 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 NPFFR2Q9Y5X5 522 aa6.42□□□□□ -1.38
HMGB3P18-201ENST00000406327 GSTA4O15217 222 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 MYO1BO43795 1136 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 RASGRP1O95267 797 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 EYA4O95677 639 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 SRFP11831 508 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 CTSKP43235 329 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 OCRLQ01968 901 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZNF460Q14592 562 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 KIZQ2M2Z5 673 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 PIK3R6Q5UE93 754 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 CDCA2Q69YH5 1023 aaPredicted RBP6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 FAM214BQ7L5A3 538 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 THAP5Q7Z6K1 395 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZC3H7AQ8IWR0 971 aaKnown RBP6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 KREMEN2Q8NCW0 462 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 DIO2Q92813 273 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 TCTN2Q96GX1 697 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 CABP5Q9NP86 173 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 TRAF6Q9Y4K3 522 aa6.41□□□□□ -1.38
HMGB3P18-201ENST00000406327 GSC2O15499 205 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 GPR39O43194 453 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 HYAL3O43820 417 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 ZNF205O95201 554 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 VAV1P15498 845 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 PAMP19021 973 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 CLCN7P51798 805 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 EVA1CP58658 441 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 PAK1Q13153 545 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 FAM50AQ14320 339 aaKnown RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 FAM47CQ5HY64 1035 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 CYP2R1Q6VVX0 501 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 RNF111Q6ZNA4 994 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 TSPYL5Q86VY4 417 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 LINC00116Q8NCU8 138 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 FRS2Q8WU20 508 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 GATA6Q92908 595 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 FCRL3Q96P31 734 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 SSBP4Q9BWG4 385 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 FAM126AQ9BYI3 521 aaPredicted RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 PUS7LQ9H0K6 701 aaKnown RBP6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 C7orf69Q9H7B7 122 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 SLC5A4Q9NY91 659 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 PCDHA9Q9Y5H5 950 aa6.4□□□□□ -1.38
HMGB3P18-201ENST00000406327 SHISA3A0PJX4 238 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 ARVCFO00192 962 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 GAS7O60861 476 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 ALDH1L1O75891 902 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 H2AFB1P0C5Y9 115 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 H2AFB2P0C5Z0 115 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 IFNGR1P15260 489 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 GTF2A2P52657 109 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 FAPQ12884 760 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 STAT4Q14765 748 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 PCBP1Q15365 356 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 LBX2Q6XYB7 198 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 PI4K2BQ8TCG2 481 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 RELTQ969Z4 430 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 MMP19Q99542 508 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 SLC12A9Q9BXP2 914 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 GEMIN8Q9NWZ8 242 aaKnown RBP6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 SAMD15Q9P1V8 674 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 CNTNAP4Q9C0A0 1308 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 WASHC2CQ9Y4E1 1318 aa6.39□□□□□ -1.39
HMGB3P18-201ENST00000406327 NPHP3-ACAD11A0A0J9YXS1 232 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 HMX2A2RU54 273 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 FAM83GA6ND36 823 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 TBC1D8O95759 1140 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 SYPP08247 313 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 GSTM1P09488 218 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 PLS3P13797 630 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 CYP4F3Q08477 520 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 RNF43Q68DV7 783 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 DENND5AQ6IQ26 1287 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 KCNT2Q6UVM3 1135 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 ZNF765Q7L2R6 523 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 TMPRSS7Q7RTY8 843 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 STRA8Q7Z7C7 330 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 C11orf74Q86VG3 221 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 FMNL3Q8IVF7 1028 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 SCYL1Q96KG9 808 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 DBNDD2Q9BQY9 259 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 MCMBPQ9BTE3 642 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 CELF4Q9BZC1 486 aaKnown RBP6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 MTFR1LQ9H019 292 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 DUSP15Q9H1R2 295 aaPredicted RBP6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 GPRC5CQ9NQ84 441 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 ATG3Q9NT62 314 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 CLEC1BQ9P126 229 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 TCFL5Q9UL49 500 aa6.38□□□□□ -1.39
HMGB3P18-201ENST00000406327 MINPP1Q9UNW1 487 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms