RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 BTBD18B2RXH4 712 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 DDX58O95786 925 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 ARID5AQ03989 594 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 SSRP1Q08945 709 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 CDCA2Q69YH5 1023 aaPredicted RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 LUC7LQ9NQ29 371 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 INTS9Q9NV88 658 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 PCDHGC5Q9Y5F6 944 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 MGRN1O60291 552 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 EPB41P11171 864 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 KLC1Q07866 573 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 PAPD7Q5XG87 772 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 MMADHCQ9H3L0 296 aaPredicted RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 LMCD1Q9NZU5 365 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 GOLGB1Q14789 3259 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 ATP6V1G1O75348 118 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 DEUP1Q05D60 604 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 PRPF4BQ13523 1007 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 TBC1D25Q3MII6 688 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 DIS3L2Q8IYB7 885 aaKnown RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 PROCA1Q8NCQ7 364 aaPredicted RBP15.42■□□□□ 0.06
DUSP28-202ENST00000405954 SLC17A8Q8NDX2 589 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 CABP5Q9NP86 173 aa15.42■□□□□ 0.06
DUSP28-202ENST00000405954 ANO9A1A5B4 782 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 ANKRD33BA6NCL7 494 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 ZNF570Q96NI8 536 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 DBNDD2Q9BQY9 259 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 VCX3BQ9H321 246 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 VCX3AQ9NNX9 186 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 NRKQ7Z2Y5 1582 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 USP31Q70CQ4 1352 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 MAIP1Q8WWC4 291 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 KAZALD1Q96I82 304 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 ORAI2Q96SN7 254 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 DPH5Q9H2P9 285 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 KCNK9Q9NPC2 374 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 SPDYE3A6NKU9 549 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 KCNJ2P63252 427 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 MRPS35P82673 323 aaKnown RBP15.41■□□□□ 0.06
DUSP28-202ENST00000405954 TRPM8Q7Z2W7 1104 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 WHAMMQ8TF30 809 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 BICD1Q96G01 975 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 NOX5Q96PH1 765 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 MYD88Q99836 296 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 VPS54Q9P1Q0 977 aa15.41■□□□□ 0.06
DUSP28-202ENST00000405954 SPATA31D1Q6ZQQ2 1576 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 A0A1B0GVG6 124 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 ZBTB43O43298 467 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 IFI16Q16666 785 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 KCTD19Q17RG1 926 aaPredicted RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 GLI1P08151 1106 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 BLMHQ13867 455 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 C1orf141Q5JVX7 400 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 INTS8Q75QN2 995 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 MMGT1Q8N4V1 131 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 CCDC155Q8N6L0 562 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 RBM41Q96IZ5 413 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 FAM114A2Q9NRY5 505 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 FAM207AQ9NSI2 230 aaPredicted RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 XRN1Q8IZH2 1706 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 FTCDO95954 541 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 HNRNPCP07910 306 aaKnown RBP eCLIP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 ALDH3A1P30838 453 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 IGHMBP2P38935 993 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 RFC5P40937 340 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 SERPINB4P48594 390 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 ALDH5A1P51649 535 aaPredicted RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 GRIN1Q05586 938 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 EHHADHQ08426 723 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 TFCP2Q12800 502 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 SEPT2Q15019 361 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 CRELD2Q6UXH1 353 aaPredicted RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 ZC3H18Q86VM9 953 aaKnown RBP15.4■□□□□ 0.06
DUSP28-202ENST00000405954 RETREG2Q8NC44 543 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 KDM4CQ9H3R0 1056 aa15.4■□□□□ 0.06
DUSP28-202ENST00000405954 TRAPPC3O43617 180 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 CEP104O60308 925 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 DNAJC8O75937 253 aaPredicted RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 NQO1P15559 274 aaKnown RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 UBE4AQ14139 1066 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 ANKLE2Q86XL3 938 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 ACSBG1Q96GR2 724 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 CSRNP2Q9H175 543 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 ATP8A1Q9Y2Q0 1164 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 FLOT1O75955 427 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 IFIT1P09914 478 aaKnown RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 RASSF7Q02833 373 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 TMED1Q13445 227 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 HAUS3Q68CZ6 603 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 USP49Q70CQ1 688 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 SDCCAG8Q86SQ7 713 aaPredicted RBP15.39■□□□□ 0.05
DUSP28-202ENST00000405954 MTRQ99707 1265 aa15.39■□□□□ 0.05
DUSP28-202ENST00000405954 PIDD1Q9HB75 910 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms