RNA–Protein interactions for RNA: ENST00000405315.8

NUCB1-201, Transcript of nucleobindin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NUCB1, Length 2,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-201ENST00000405315 RRP36Q96EU6 259 aaKnown RBP16.35■□□□□ 0.21
NUCB1-201ENST00000405315 CAPZA3Q96KX2 299 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 MMS19Q96T76 1030 aa16.35■□□□□ 0.21
NUCB1-201ENST00000405315 RCCD1A6NED2 376 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 LDHCP07864 332 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 GNA11P29992 359 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 PAPD7Q5XG87 772 aaKnown RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 USP17L2Q6R6M4 530 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 ZNF804AQ7Z570 1209 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 RTFDC1Q9BY42 306 aaPredicted RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 LACRTQ9GZZ8 138 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 ZNF287Q9HBT7 754 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 PSD3Q9NYI0 1048 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 EIF3CLB5ME19 914 aaKnown RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 PPP1R2P41236 205 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 CDK8P49336 464 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 USP14P54578 494 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 AMPD3Q01432 767 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 RC3H1Q5TC82 1133 aaKnown RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 CCDC170Q8IYT3 715 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 HPS3Q969F9 1004 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 EIF3CQ99613 913 aaKnown RBP16.34■□□□□ 0.21
NUCB1-201ENST00000405315 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
NUCB1-201ENST00000405315 BTDP43251 543 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 NFIXQ14938 502 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 CNNM4Q6P4Q7 775 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 POTEDQ86YR6 584 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 TBCKQ8TEA7 893 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 CCDC102AQ96A19 550 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 CALML4Q96GE6 196 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 MMTAG2Q9BU76 263 aaKnown RBP16.33■□□□□ 0.21
NUCB1-201ENST00000405315 VAT1LQ9HCJ6 419 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 BTAF1O14981 1849 aa16.33■□□□□ 0.21
NUCB1-201ENST00000405315 CKAP4Q07065 602 aaKnown RBP16.33■□□□□ 0.2
NUCB1-201ENST00000405315 GRAPQ13588 217 aa16.33■□□□□ 0.2
NUCB1-201ENST00000405315 FKBP15Q5T1M5 1219 aa16.33■□□□□ 0.2
NUCB1-201ENST00000405315 C16orf86Q6ZW13 317 aa16.33■□□□□ 0.2
NUCB1-201ENST00000405315 GRAPLQ8TC17 118 aaPredicted RBP16.33■□□□□ 0.2
NUCB1-201ENST00000405315 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 CYP27A1Q02318 531 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 MUM1L1Q5H9M0 696 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 AMIGO3Q86WK7 504 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 ZSCAN29Q8IWY8 852 aaPredicted RBP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 ERGIC2Q96RQ1 377 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 PIGSQ96S52 555 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 ACBD3Q9H3P7 528 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 SLC39A2Q9NP94 309 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 BIN2Q9UBW5 565 aaPredicted RBP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 MACROD2A1Z1Q3 448 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 NKRFO15226 690 aaKnown RBP eCLIP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 ZSCAN26Q16670 478 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 HSP90B2PQ58FF3 399 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 TEX11Q8IYF3 940 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 NEDD1Q8NHV4 660 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 CAGE1Q8TC20 777 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 SEMA6BQ9H3T3 888 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 RTCBQ9Y3I0 505 aaKnown RBP16.32■□□□□ 0.2
NUCB1-201ENST00000405315 A0A1W2PQJ5 194 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 TXKP42681 527 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 DUSP10Q9Y6W6 482 aa16.32■□□□□ 0.2
NUCB1-201ENST00000405315 TNNT3P45378 269 aaPredicted RBP16.31■□□□□ 0.2
NUCB1-201ENST00000405315 FIGNQ5HY92 759 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 FAM71BQ8TC56 605 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 CEP95Q96GE4 821 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 ANO9A1A5B4 782 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 IDEP14735 1019 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 MCM3P25205 808 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 VAV2P52735 878 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 GRB10Q13322 594 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 COBLL1Q53SF7 1204 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 SV2BQ7L1I2 683 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
NUCB1-201ENST00000405315 RPGRIP1Q96KN7 1286 aa16.31■□□□□ 0.2
NUCB1-201ENST00000405315 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
NUCB1-201ENST00000405315 PLEKP08567 350 aaPredicted RBP16.3■□□□□ 0.2
NUCB1-201ENST00000405315 CDK17Q00537 523 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 KIF5AQ12840 1032 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 SPA17Q15506 151 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 MAP9Q49MG5 647 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 SECISBP2LQ93073 1101 aaKnown RBP16.3■□□□□ 0.2
NUCB1-201ENST00000405315 CCDC42Q96M95 316 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 LRWD1Q9UFC0 647 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 ZNF185O15231 689 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 PHACTR2O75167 634 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
NUCB1-201ENST00000405315 CALCRLQ16602 461 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 CCDC96Q2M329 555 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 CENPPQ6IPU0 288 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 GOLGA5Q8TBA6 731 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 TRERF1Q96PN7 1200 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 TSGA10Q9BZW7 698 aa16.3■□□□□ 0.2
NUCB1-201ENST00000405315 JADE2Q9NQC1 790 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms