RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 GJA10Q969M2 543 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 CXorf56Q9H5V9 222 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 PCDH11XQ9BZA7 1347 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 PCDH11YQ9BZA8 1340 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 ZNF233A6NK53 670 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 LSP1P33241 339 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 TXNRD1Q16881 649 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 SUSD4Q5VX71 490 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 IQCEQ6IPM2 695 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 BICDL1Q6ZP65 573 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 CCDC91Q7Z6B0 441 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 BLIDQ8IZY5 108 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 DYNLL2Q96FJ2 89 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 STX8Q9UNK0 236 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 PDS5AQ29RF7 1337 aaKnown RBP10.62□□□□□ -0.71
SMC1B-202ENST00000404354 CNTNAP5Q8WYK1 1306 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 RTL9Q8NET4 1388 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 KLRC4O43908 158 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 SHOX2O60902 331 aaPredicted RBP10.62□□□□□ -0.71
SMC1B-202ENST00000404354 EEF1GP26641 437 aaKnown RBP10.62□□□□□ -0.71
SMC1B-202ENST00000404354 SF3B2Q13435 895 aaKnown RBP10.62□□□□□ -0.71
SMC1B-202ENST00000404354 MSL3Q8N5Y2 521 aaKnown RBP10.62□□□□□ -0.71
SMC1B-202ENST00000404354 TRIM58Q8NG06 486 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 P2RX5Q93086 422 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 SCLT1Q96NL6 688 aa10.62□□□□□ -0.71
SMC1B-202ENST00000404354 FGFR2P21802 821 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 TXKP42681 527 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 CHRNDQ07001 517 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 TRIM31Q9BZY9 425 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 DNAJC5Q9H3Z4 198 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 GEMIN8Q9NWZ8 242 aaKnown RBP10.61□□□□□ -0.71
SMC1B-202ENST00000404354 TFCP2L1Q9NZI6 479 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 ERVV-2B6SEH9 535 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 CCNT1O60563 726 aaKnown RBP10.61□□□□□ -0.71
SMC1B-202ENST00000404354 BMP15O95972 392 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 IL2RBP14784 551 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 NAA35Q5VZE5 725 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 TICAM2Q86XR7 235 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 SLC4A9Q96Q91 983 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 TLR10Q9BXR5 811 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 SH2D4AQ9H788 454 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
SMC1B-202ENST00000404354 WDR17Q8IZU2 1322 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 MYH2Q9UKX2 1941 aa10.61□□□□□ -0.71
SMC1B-202ENST00000404354 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 GOLGA8KD6RF30 607 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 GNAT2P19087 354 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 EPHB4P54760 987 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 CT47A1Q5JQC4 288 aaPredicted RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 MIIPQ5JXC2 388 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 CABP7Q86V35 215 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 RPGRIP1Q96KN7 1286 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 ALS2CR12Q96Q35 445 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 AP1M1Q9BXS5 423 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 PACSIN1Q9BY11 444 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 HYOU1Q9Y4L1 999 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 AKAP11Q9UKA4 1901 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SIPA1L3O60292 1781 aaPredicted RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 PALMO75781 387 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 USP17L8P0C7I0 530 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 NR1D1P20393 614 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SETQ01105 290 aaPredicted RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SPRED3Q2MJR0 410 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 GBP6Q6ZN66 633 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SLC44A5Q8NCS7 719 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 CCT8L2Q96SF2 557 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SH3GL2Q99962 352 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 TTYH3Q9C0H2 523 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 A0A1W2PQC6 194 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SMIM23A6NLE4 172 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 KLRK1P26718 216 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 IGHMBP2P38935 993 aaKnown RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 TRIM28Q13263 835 aaKnown RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 MEA1Q16626 185 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 ADAT2Q7Z6V5 191 aaKnown RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 GIMAP8Q8ND71 665 aaPredicted RBP10.6□□□□□ -0.71
SMC1B-202ENST00000404354 SEMA6BQ9H3T3 888 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 ZHX3Q9H4I2 956 aa10.6□□□□□ -0.71
SMC1B-202ENST00000404354 MEFVO15553 781 aaPredicted RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 ZNF473Q8WTR7 871 aaKnown RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 CCDC114Q96M63 670 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 PLA2G12BQ9BX93 195 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 NDST4Q9H3R1 872 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 THAP9Q9H5L6 903 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 MCM9Q9NXL9 1143 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 ADAMTS1Q9UHI8 967 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 ADAMTSL3P82987 1691 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 SCN11AQ9UI33 1791 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 ECM29Q5VYK3 1845 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 RPSAP08865 295 aaKnown RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 PDHBP11177 359 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 RDXP35241 583 aaKnown RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 LONP1P36776 959 aaKnown RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 TFAP4Q01664 338 aa10.59□□□□□ -0.71
SMC1B-202ENST00000404354 SUGP1Q8IWZ8 645 aaKnown RBP10.59□□□□□ -0.71
SMC1B-202ENST00000404354 NELFCDQ8IXH7 590 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms