RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 ABHD16BQ9H3Z7 469 aa22.27■■□□□ 1.16
RTN4-207ENST00000402434 ADD3Q9UEY8 706 aaKnown RBP22.27■■□□□ 1.16
RTN4-207ENST00000402434 LCTP09848 1927 aa22.27■■□□□ 1.15
RTN4-207ENST00000402434 MCM3APO60318 1980 aa22.27■■□□□ 1.15
RTN4-207ENST00000402434 KLF18A0A0U1RQI7 1052 aa22.26■■□□□ 1.15
RTN4-207ENST00000402434 FARP2O94887 1054 aaPredicted RBP22.26■■□□□ 1.15
RTN4-207ENST00000402434 CALML3P27482 149 aa22.26■■□□□ 1.15
RTN4-207ENST00000402434 BRF1Q92994 677 aa22.26■■□□□ 1.15
RTN4-207ENST00000402434 RRP36Q96EU6 259 aaKnown RBP22.26■■□□□ 1.15
RTN4-207ENST00000402434 KATNBL1Q9H079 304 aa22.26■■□□□ 1.15
RTN4-207ENST00000402434 SEC24BO95487 1268 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 EVCP57679 992 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 ANAPC15P60006 121 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 ACVR2BQ13705 512 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 CMTR1Q8N1G2 835 aaKnown RBP22.25■■□□□ 1.15
RTN4-207ENST00000402434 DNERQ8NFT8 737 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 IL17RAQ96F46 866 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 FAM217BQ9NTX9 383 aaPredicted RBP22.25■■□□□ 1.15
RTN4-207ENST00000402434 RBM28Q9NW13 759 aaKnown RBP22.25■■□□□ 1.15
RTN4-207ENST00000402434 CYP46A1Q9Y6A2 500 aa22.25■■□□□ 1.15
RTN4-207ENST00000402434 TNRC18O15417 2968 aaPredicted RBP22.24■■□□□ 1.15
RTN4-207ENST00000402434 ALDH5A1P51649 535 aaPredicted RBP22.24■■□□□ 1.15
RTN4-207ENST00000402434 APOBRQ0VD83 1088 aa22.24■■□□□ 1.15
RTN4-207ENST00000402434 PPP2R5BQ15173 497 aa22.24■■□□□ 1.15
RTN4-207ENST00000402434 SAMD3Q8N6K7 520 aa22.24■■□□□ 1.15
RTN4-207ENST00000402434 MAP3K20Q9NYL2 800 aaKnown RBP22.24■■□□□ 1.15
RTN4-207ENST00000402434 AKR1A1P14550 325 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 HSD17B4P51659 736 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 FUT2Q10981 343 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 RTN1Q16799 776 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 C8orf34Q49A92 452 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 SYTL5Q8TDW5 730 aaPredicted RBP22.23■■□□□ 1.15
RTN4-207ENST00000402434 PAWRQ96IZ0 340 aaKnown RBP22.23■■□□□ 1.15
RTN4-207ENST00000402434 FAM184BQ9ULE4 1060 aa22.23■■□□□ 1.15
RTN4-207ENST00000402434 EDNRBP24530 442 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 PIBF1Q8WXW3 757 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 UPF3BQ9BZI7 483 aaKnown RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 COL20A1Q9P218 1284 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 SEC63Q9UGP8 760 aaKnown RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 ZHX1Q9UKY1 873 aaPredicted RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 DDX49Q9Y6V7 483 aaKnown RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 FRMPD3Q5JV73 1810 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 GOLGA8AA7E2F4 631 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 GOLGA8BA8MQT2 603 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 RARBP10826 455 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 TOB2Q14106 344 aaPredicted RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 CCDC144BQ3MJ40 725 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 ANO1Q5XXA6 986 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 CCDC82Q8N4S0 544 aa22.22■■□□□ 1.15
RTN4-207ENST00000402434 DIS3LQ8TF46 1054 aaKnown RBP22.22■■□□□ 1.15
RTN4-207ENST00000402434 NID2Q14112 1375 aa22.21■■□□□ 1.15
RTN4-207ENST00000402434 CFBP00751 764 aa22.21■■□□□ 1.15
RTN4-207ENST00000402434 CDC27P30260 824 aa22.21■■□□□ 1.15
RTN4-207ENST00000402434 NECAB2Q7Z6G3 386 aa22.21■■□□□ 1.15
RTN4-207ENST00000402434 ARRDC4Q8NCT1 418 aa22.21■■□□□ 1.15
RTN4-207ENST00000402434 CCDC196A0A1B0GTZ2 297 aa22.2■■□□□ 1.14
RTN4-207ENST00000402434 COL6A1P12109 1028 aa22.2■■□□□ 1.14
RTN4-207ENST00000402434 METAP2P50579 478 aaKnown RBP eCLIP22.2■■□□□ 1.14
RTN4-207ENST00000402434 TAAR1Q96RJ0 339 aa22.2■■□□□ 1.14
RTN4-207ENST00000402434 VTA1Q9NP79 307 aa22.2■■□□□ 1.14
RTN4-207ENST00000402434 CNTNAP5Q8WYK1 1306 aa22.19■■□□□ 1.14
RTN4-207ENST00000402434 B4DLN1 442 aa22.19■■□□□ 1.14
RTN4-207ENST00000402434 DNM1LO00429 736 aa22.19■■□□□ 1.14
RTN4-207ENST00000402434 DUSP11O75319 330 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 PDIA3P30101 505 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 ADD1P35611 737 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 MRPL12P52815 198 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 TAPT1Q6NXT6 567 aa22.19■■□□□ 1.14
RTN4-207ENST00000402434 NSUN6Q8TEA1 469 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 MPHOSPH6Q99547 160 aaKnown RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 NAP1L2Q9ULW6 460 aaPredicted RBP22.19■■□□□ 1.14
RTN4-207ENST00000402434 ADCY6O43306 1168 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 IWS1Q96ST2 819 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 RMDN3Q96TC7 470 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 ALDH8A1Q9H2A2 487 aaPredicted RBP22.18■■□□□ 1.14
RTN4-207ENST00000402434 C11orf49Q9H6J7 331 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 XPNPEP3Q9NQH7 507 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 PDRG1Q9NUG6 133 aa22.18■■□□□ 1.14
RTN4-207ENST00000402434 hCG_1642624A0A1W2PR95 340 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 GCOM1H8Y6P7 765 aaPredicted RBP22.17■■□□□ 1.14
RTN4-207ENST00000402434 POLR2MP0CAP2 368 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 LRRC41Q15345 812 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 IQSEC1Q6DN90 963 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 EEPD1Q7L9B9 569 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 FBXO16Q8IX29 292 aaPredicted RBP22.17■■□□□ 1.14
RTN4-207ENST00000402434 LENG1Q96BZ8 264 aaPredicted RBP22.17■■□□□ 1.14
RTN4-207ENST00000402434 HTATIP2Q9BUP3 242 aa22.17■■□□□ 1.14
RTN4-207ENST00000402434 RBM47A0AV96 593 aaKnown RBP22.16■■□□□ 1.14
RTN4-207ENST00000402434 HOXA13P31271 388 aaPredicted RBP22.16■■□□□ 1.14
RTN4-207ENST00000402434 PDE4DQ08499 809 aa22.16■■□□□ 1.14
RTN4-207ENST00000402434 GJC2Q5T442 439 aaPredicted RBP22.16■■□□□ 1.14
RTN4-207ENST00000402434 ZNF274Q96GC6 653 aaPredicted RBP22.16■■□□□ 1.14
RTN4-207ENST00000402434 PDGFCQ9NRA1 345 aa22.16■■□□□ 1.14
RTN4-207ENST00000402434 V9GY48 417 aaPredicted RBP22.16■■□□□ 1.14
RTN4-207ENST00000402434 LRRC37A2A6NM11 1700 aa22.16■■□□□ 1.14
RTN4-207ENST00000402434 ADAMTS4O75173 837 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 PGK1P00558 417 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 ADCYAP1R1P41586 468 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 NKX3-2P78367 333 aa22.15■■□□□ 1.14
RTN4-207ENST00000402434 TNFAIP2Q03169 654 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms