RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ZNF280CQ8ND82 737 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 DCPSQ96C86 337 aaKnown RBP29.02■■■□□ 2.24
CPNE1-205ENST00000401607 SLF1Q9BQI6 1058 aa29.02■■■□□ 2.24
CPNE1-205ENST00000401607 PYM1Q9BRP8 204 aaKnown RBP29.02■■■□□ 2.24
CPNE1-205ENST00000401607 PIK3CDO00329 1044 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 TXLNAP40222 546 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 BACE1P56817 501 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.01■■■□□ 2.234e-6■□□□□ 10.7
CPNE1-205ENST00000401607 AK8Q96MA6 479 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 CCSER1Q9C0I3 900 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 AP5Z1O43299 807 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 USP2O75604 605 aaPredicted RBP29.01■■■□□ 2.23
CPNE1-205ENST00000401607 GCFC2P16383 781 aaKnown RBP29.01■■■□□ 2.23
CPNE1-205ENST00000401607 SARSP49591 514 aaKnown RBP29.01■■■□□ 2.23
CPNE1-205ENST00000401607 GPR162Q16538 588 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 NT5DC1Q5TFE4 455 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 PDXDC2PQ6P474 469 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 IQUBQ8NA54 791 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 PRPF38AQ8NAV1 312 aaKnown RBP29.01■■■□□ 2.23
CPNE1-205ENST00000401607 PAGE5Q96GU1 130 aa29.01■■■□□ 2.23
CPNE1-205ENST00000401607 DDX25Q9UHL0 483 aaKnown RBP29.01■■■□□ 2.23
CPNE1-205ENST00000401607 FOSP01100 380 aaPredicted RBP29■■■□□ 2.23
CPNE1-205ENST00000401607 USP11P51784 963 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 KARSQ15046 597 aaKnown RBP29■■■□□ 2.23
CPNE1-205ENST00000401607 ISM2Q6H9L7 571 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 LDHDQ86WU2 507 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 SULF1Q8IWU6 871 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 NAP1L4Q99733 375 aaKnown RBP29■■■□□ 2.23
CPNE1-205ENST00000401607 ZHX2Q9Y6X8 837 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 PAPPA2Q9BXP8 1791 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 ZNF536O15090 1300 aa29■■■□□ 2.23
CPNE1-205ENST00000401607 HOXA13P31271 388 aaPredicted RBP28.99■■■□□ 2.23
CPNE1-205ENST00000401607 TECP42680 631 aa28.99■■■□□ 2.23
CPNE1-205ENST00000401607 PRKG1Q13976 671 aa28.99■■■□□ 2.23
CPNE1-205ENST00000401607 TEX2Q8IWB9 1127 aa28.99■■■□□ 2.23
CPNE1-205ENST00000401607 IGSF22Q8N9C0 903 aa28.99■■■□□ 2.23
CPNE1-205ENST00000401607 SPATA20Q8TB22 786 aa28.99■■■□□ 2.23
CPNE1-205ENST00000401607 TXKP42681 527 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 DHX40Q8IX18 779 aaKnown RBP28.98■■■□□ 2.23
CPNE1-205ENST00000401607 CCDC34Q96HJ3 373 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 MBOAT7Q96N66 472 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 TANGO6Q9C0B7 1094 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 RPAP3Q9H6T3 665 aaPredicted RBP28.98■■■□□ 2.23
CPNE1-205ENST00000401607 DISC1Q9NRI5 854 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 MAN1B1Q9UKM7 699 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 MRPL11Q9Y3B7 192 aaKnown RBP28.98■■■□□ 2.23
CPNE1-205ENST00000401607 ABCB11O95342 1321 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 CYP3A7-CYP3A51PA0A087WV96 503 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 SPDYE3A6NKU9 549 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 CYP3A7P24462 503 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 SREBF1P36956 1147 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 UBA7P41226 1012 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 AFMP43652 599 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 FXR2P51116 673 aaKnown RBP eCLIP28.98■■■□□ 2.232e-6■■■□□ 18.4
CPNE1-205ENST00000401607 ARHGAP4P98171 946 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 TBC1D5Q92609 795 aa28.98■■■□□ 2.23
CPNE1-205ENST00000401607 NAT10Q9H0A0 1025 aaKnown RBP28.98■■■□□ 2.23
CPNE1-205ENST00000401607 PARP14Q460N5 1801 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 ICAM1P05362 532 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 MOXD1Q6UVY6 613 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 USP50Q70EL3 339 aaPredicted RBP28.97■■■□□ 2.23
CPNE1-205ENST00000401607 HAS1Q92839 578 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 SMARCE1Q969G3 411 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 C12orf42Q96LP6 360 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 BPIFA3Q9BQP9 254 aa28.97■■■□□ 2.23
CPNE1-205ENST00000401607 ZC3H4Q9UPT8 1303 aaKnown RBP28.97■■■□□ 2.23
CPNE1-205ENST00000401607 EPHX2P34913 555 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 AGBL1Q96MI9 1066 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 MTRQ99707 1265 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 PPP1R9AQ9ULJ8 1098 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 FLOT1O75955 427 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 BMP6P22004 513 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 NAALADL2Q58DX5 795 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.96■■■□□ 2.23
CPNE1-205ENST00000401607 KRT26Q7Z3Y9 468 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 CABP7Q86V35 215 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 SLC38A10Q9HBR0 1119 aa28.96■■■□□ 2.23
CPNE1-205ENST00000401607 GLTPD2A6NH11 291 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 ADCY5O95622 1261 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 CFBP00751 764 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 CASP1P29466 404 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 STAT6P42226 847 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 DPYDQ12882 1025 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 MMTAG2Q9BU76 263 aaKnown RBP28.95■■■□□ 2.22
CPNE1-205ENST00000401607 CCPG1Q9ULG6 757 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 SNCAIPQ9Y6H5 919 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 OTOFQ9HC10 1997 aa28.95■■■□□ 2.22
CPNE1-205ENST00000401607 GCOM1H8Y6P7 765 aaPredicted RBP28.94■■■□□ 2.22
CPNE1-205ENST00000401607 POLR2MP0CAP2 368 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 HMGCS2P54868 508 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 AOPEPQ8N6M6 819 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 LRRC15Q8TF66 581 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 STAMQ92783 540 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 AFG3L2Q9Y4W6 797 aa28.94■■■□□ 2.22
CPNE1-205ENST00000401607 C19orf81C9J6K1 198 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 MORC3Q14149 939 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 TMEM266Q2M3C6 531 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 RRAGBQ5VZM2 374 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 KCNMB3Q9NPA1 279 aa28.93■■■□□ 2.22
CPNE1-205ENST00000401607 CCDC39Q9UFE4 941 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms