RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 ARL10Q8N8L6 244 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 GIMAP7Q8NHV1 300 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 HDAC7Q8WUI4 952 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 FAM84BQ96KN1 310 aaPredicted RBP6.96□□□□□ -1.3
CLIP4-202ENST00000401605 DHRS1Q96LJ7 313 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 FAM81BQ96LP2 452 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 PUS3Q9BZE2 481 aaKnown RBP6.96□□□□□ -1.3
CLIP4-202ENST00000401605 TRIM6Q9C030 488 aaPredicted RBP6.96□□□□□ -1.3
CLIP4-202ENST00000401605 MCOLN1Q9GZU1 580 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.96□□□□□ -1.3
CLIP4-202ENST00000401605 SPATA7Q9P0W8 599 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 ATP8A1Q9Y2Q0 1164 aa6.96□□□□□ -1.3
CLIP4-202ENST00000401605 COL1A1P02452 1464 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CCDC85CA6NKD9 419 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 GPR182O15218 404 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 MMEP08473 750 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 MPSTP25325 297 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 DNAJB2P25686 324 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 TPP2P29144 1249 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 GYG1P46976 350 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 SEC13P55735 322 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 DEUP1Q05D60 604 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 DGKZQ13574 1117 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 KRT72Q14CN4 511 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 SUPT20HL1Q3ZLR7 823 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PLEKHG4Q58EX7 1191 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 METTL24Q5JXM2 366 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 TRAF7Q6Q0C0 670 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 NUDT18Q6ZVK8 323 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF654Q8IZM8 581 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CLASRPQ8N2M8 674 aaKnown RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 ANKRD44Q8N8A2 993 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 UHMK1Q8TAS1 419 aaKnown RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PPM1EQ8WY54 764 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 USP44Q9H0E7 712 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 EXOC1Q9NV70 894 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 HOXC10Q9NYD6 342 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 TMEM63CQ9P1W3 806 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 BARX2Q9UMQ3 279 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 JAG2Q9Y219 1238 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 TMEM98Q9Y2Y6 226 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 SCN9AQ15858 1988 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PPP1R12BO60237 982 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 E2F6O75461 281 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PDE8BO95263 885 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 SREBF2Q12772 1141 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 GRIK3Q13003 919 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 TNFAIP1Q13829 316 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 MAP3K11Q16584 847 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PREPLQ4J6C6 727 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CAVIN4Q5BKX8 364 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PCGF5Q86SE9 256 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PRPF38AQ8NAV1 312 aaKnown RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 HELQQ8TDG4 1101 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 SRPK1Q96SB4 655 aaKnown RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CHMP5Q9NZZ3 219 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CLIP2Q9UDT6 1046 aa6.95□□□□□ -1.3
CLIP4-202ENST00000401605 ANGEL1Q9UNK9 670 aaKnown RBP6.95□□□□□ -1.3
CLIP4-202ENST00000401605 CLRN2A0PK11 232 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 MTA2O94776 668 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 SH3BGRP55822 239 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 HNRNPUQ00839 825 aaKnown RBP eCLIP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PTPN12Q05209 780 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TBC1D8BQ0IIM8 1120 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 EIF2B5Q13144 721 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PRKG1Q13976 671 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 LRRC24Q50LG9 513 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 RNF20Q5VTR2 975 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 SFMBT2Q5VUG0 894 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 FAAH2Q6GMR7 532 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 SKAP1Q86WV1 359 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 CCDC65Q8IXS2 484 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TRMT2AQ8IZ69 625 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF483Q8TF39 744 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 GIMAP1Q8WWP7 306 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 CEP63Q96MT8 703 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 BAG1Q99933 345 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TMCC3Q9ULS5 477 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PCDHAC2Q9Y5I4 1007 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 ERLIN1O75477 346 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 IFIT1P09914 478 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PECAM1P16284 738 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 HOXD10P28358 340 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TM4SF4P48230 202 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 CDR1P51861 262 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PLCB3Q01970 1234 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TRIM29Q14134 588 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PKN1Q16512 942 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 AKNAD1Q5T1N1 836 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 FERMT3Q86UX7 667 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 VGLL2Q8N8G2 317 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 MIPOL1Q8TD10 442 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 IL17RAQ96F46 866 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 HINFPQ9BQA5 517 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PRKD2Q9BZL6 878 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 FANCLQ9NW38 375 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 COMMD8Q9NX08 183 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms