RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 KIAA1211Q6ZU35 1233 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 TRIM43Q96BQ3 446 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-203ENST00000400772 MTMR8Q96EF0 704 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 VTA1Q9NP79 307 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 PDLIM7Q9NR12 457 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 ABCB11O95342 1321 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 EDNRBP24530 442 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 BEX3Q00994 111 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 TROAPQ12815 778 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 GRM4Q14833 912 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 WTAPQ15007 396 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 NECTIN1Q15223 517 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 GNASQ5JWF2 1037 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 PCSK9Q8NBP7 692 aaKnown RBP18.49■□□□□ 0.55
ATG4B-203ENST00000400772 NUP133Q8WUM0 1156 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 UBE2OQ9C0C9 1292 aaKnown RBP18.49■□□□□ 0.55
ATG4B-203ENST00000400772 SPC25Q9HBM1 224 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 STARD7Q9NQZ5 370 aa18.49■□□□□ 0.55
ATG4B-203ENST00000400772 RBM47A0AV96 593 aaKnown RBP18.48■□□□□ 0.55
ATG4B-203ENST00000400772 ERICH2A1L162 156 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 SLC27A2O14975 620 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 DHX16O60231 1041 aaKnown RBP18.48■□□□□ 0.55
ATG4B-203ENST00000400772 PPP1R11O60927 126 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-203ENST00000400772 NOL8Q76FK4 1167 aaKnown RBP18.48■□□□□ 0.55
ATG4B-203ENST00000400772 TLK2Q86UE8 772 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 FBXO11Q86XK2 927 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 DNERQ8NFT8 737 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 MAF1Q9H063 256 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 GPHNQ9NQX3 736 aaPredicted RBP18.48■□□□□ 0.55
ATG4B-203ENST00000400772 COL20A1Q9P218 1284 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 PRKAG2Q9UGJ0 569 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 Q9Y3F1 56 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 ELP1O95163 1332 aa18.48■□□□□ 0.55
ATG4B-203ENST00000400772 DYNC1LI2O43237 492 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-203ENST00000400772 ITGB8P26012 769 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 CDK7P50613 346 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 TMEM67Q5HYA8 995 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 CREB3L3Q68CJ9 461 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 ANKRD33Q7Z3H0 272 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 TDHQ8IZJ6 230 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 SYTL5Q8TDW5 730 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-203ENST00000400772 RIOX1Q9H6W3 641 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 LY9Q9HBG7 655 aa18.47■□□□□ 0.55
ATG4B-203ENST00000400772 PRDM5Q9NQX1 630 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-203ENST00000400772 OPLAHO14841 1288 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 ZBTB5O15062 677 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 CYTH3O43739 400 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 PQBP1O60828 265 aaKnown RBP18.46■□□□□ 0.55
ATG4B-203ENST00000400772 CLTBP09497 229 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 FAAP100Q0VG06 881 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.55
ATG4B-203ENST00000400772 FSCN1Q16658 493 aaKnown RBP18.46■□□□□ 0.55
ATG4B-203ENST00000400772 DUSP28Q4G0W2 176 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 GLT1D1Q96MS3 346 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 TOX2Q96NM4 488 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 TAAR1Q96RJ0 339 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 LBHD1Q9BQE6 289 aaPredicted RBP18.46■□□□□ 0.55
ATG4B-203ENST00000400772 AMNQ9BXJ7 453 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 WDR11Q9BZH6 1224 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 ANO2Q9NQ90 1003 aa18.46■□□□□ 0.55
ATG4B-203ENST00000400772 MRPL11Q9Y3B7 192 aaKnown RBP18.46■□□□□ 0.55
ATG4B-203ENST00000400772 LTBP2Q14767 1821 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 PRC1O43663 620 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 PDE4DQ08499 809 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 LRIT3Q3SXY7 679 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 MCF2L2Q86YR7 1114 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 BADQ92934 168 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 LRCH3Q96II8 777 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 MTA3Q9BTC8 594 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 AP5M1Q9H0R1 490 aa18.45■□□□□ 0.54
ATG4B-203ENST00000400772 KIAA0355O15063 1070 aa18.44■□□□□ 0.54
ATG4B-203ENST00000400772 GHRHRQ02643 423 aa18.44■□□□□ 0.54
ATG4B-203ENST00000400772 CXCL17Q6UXB2 119 aa18.44■□□□□ 0.54
ATG4B-203ENST00000400772 CATIPQ7Z7H3 387 aa18.44■□□□□ 0.54
ATG4B-203ENST00000400772 PIGSQ96S52 555 aa18.44■□□□□ 0.54
ATG4B-203ENST00000400772 MYH6P13533 1939 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 BAZ2BQ9UIF8 2168 aaKnown RBP18.43■□□□□ 0.54
ATG4B-203ENST00000400772 A0A0U1RQG5 324 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-203ENST00000400772 ARVCFO00192 962 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 SH2B2O14492 632 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-203ENST00000400772 MCM5P33992 734 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 HSD17B4P51659 736 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 ZNF654Q8IZM8 581 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 SLC43A3Q8NBI5 491 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 NSUN6Q8TEA1 469 aaKnown RBP18.43■□□□□ 0.54
ATG4B-203ENST00000400772 VTI1AQ96AJ9 217 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 MYL10Q9BUA6 226 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 PCDHA1Q9Y5I3 950 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 GRIN2DO15399 1336 aa18.43■□□□□ 0.54
ATG4B-203ENST00000400772 DCDC2CA8MYV0 355 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 CDC45O75419 566 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 ARIH2O95376 493 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 CASC1Q6TDU7 716 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 HOMER1Q86YM7 354 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 COPS5Q92905 334 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 MPHOSPH6Q99547 160 aaKnown RBP18.42■□□□□ 0.54
ATG4B-203ENST00000400772 MAP3K14Q99558 947 aa18.42■□□□□ 0.54
ATG4B-203ENST00000400772 TMEM39AQ9NV64 488 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms