RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SLC27A2O14975 620 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 CTAGE5O15320 804 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 EDNRBP24530 442 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 TROAPQ12815 778 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 NECTIN1Q15223 517 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 TMEM67Q5HYA8 995 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 SKAP1Q86WV1 359 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 MCF2L2Q86YR7 1114 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 IGDCC4Q8TDY8 1250 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 STARD7Q9NQZ5 370 aa17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 MRPL11Q9Y3B7 192 aaKnown RBP17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 DDX49Q9Y6V7 483 aaKnown RBP17.32■□□□□ 0.36
SMIM11A-203ENST00000399299 B4DLN1 442 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 ASGR1P07306 291 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 SMPD1P17405 629 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 MRPL12P52815 198 aaKnown RBP17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 TLE2Q04725 743 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 GNASQ5JWF2 1037 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 ANKRD33Q7Z3H0 272 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 TLK2Q86UE8 772 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 GLT1D1Q96MS3 346 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 TOX2Q96NM4 488 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 MAP3K14Q99558 947 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 LBHD1Q9BQE6 289 aaPredicted RBP17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 AMNQ9BXJ7 453 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 VAT1LQ9HCJ6 419 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 PDLIM7Q9NR12 457 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
SMIM11A-203ENST00000399299 SZT2Q5T011 3432 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 RBM47A0AV96 593 aaKnown RBP17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 ZBTB5O15062 677 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 MCM5P33992 734 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 IRX5P78411 483 aaPredicted RBP17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 MDM2Q00987 491 aaPredicted RBP17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 GHRHRQ02643 423 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 PDE4DQ08499 809 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 TRAF1Q13077 416 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 CREB3L3Q68CJ9 461 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 EEPD1Q7L9B9 569 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 CHST3Q7LGC8 479 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 CATIPQ7Z7H3 387 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 TDHQ8IZJ6 230 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 TMEM87BQ96K49 555 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 AP5M1Q9H0R1 490 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 RIOX1Q9H6W3 641 aa17.3■□□□□ 0.36
SMIM11A-203ENST00000399299 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 MROH7Q68CQ1 1323 aa17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 CDC45O75419 566 aa17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 CLTBP09497 229 aa17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 FSCN1Q16658 493 aaKnown RBP17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 SYTL5Q8TDW5 730 aaPredicted RBP17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 LY9Q9HBG7 655 aa17.29■□□□□ 0.36
SMIM11A-203ENST00000399299 KIAA1217Q5T5P2 1943 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 A0A0U1RQG5 324 aaPredicted RBP17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 DYNC1LI2O43237 492 aaPredicted RBP17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 PRC1O43663 620 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 CABYRO75952 493 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 DDAH1O94760 285 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 CDK7P50613 346 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 BEX3Q00994 111 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 SLC35G1Q2M3R5 365 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 RNF20Q5VTR2 975 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 ZNF654Q8IZM8 581 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 TMTC2Q8N394 836 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 SAMD3Q8N6K7 520 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 SCFD2Q8WU76 684 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 TBC1D5Q92609 795 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 WDR11Q9BZH6 1224 aa17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 PRDM5Q9NQX1 630 aaPredicted RBP17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 MAP3K20Q9NYL2 800 aaKnown RBP17.28■□□□□ 0.36
SMIM11A-203ENST00000399299 DCDC2CA8MYV0 355 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 SH2B2O14492 632 aaPredicted RBP17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 OPLAHO14841 1288 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 KIAA0355O15063 1070 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 NKRFO15226 690 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 CYTH3O43739 400 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 ZEB2O60315 1214 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 PQBP1O60828 265 aaKnown RBP17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 LIFRP42702 1097 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 HSD17B4P51659 736 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 LRIT3Q3SXY7 679 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 TMEM63BQ5T3F8 832 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 SH3RF1Q7Z6J0 888 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 NSUN6Q8TEA1 469 aaKnown RBP17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 IWS1Q96ST2 819 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 COL20A1Q9P218 1284 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
SMIM11A-203ENST00000399299 PNMA6FA0A0J9YX94 578 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 TRIM43BA6NCK2 446 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 ARVCFO00192 962 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 NEFLP07196 543 aa17.26■□□□□ 0.35
SMIM11A-203ENST00000399299 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms