RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 LARGE2Q8N3Y3 721 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 CNOT6LQ96LI5 555 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 MYL10Q9BUA6 226 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 ACTR5Q9H9F9 607 aaPredicted RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 ARHGEF37A1IGU5 675 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 TAF5LO75529 589 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 EIF3BP55884 814 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 ADAM9Q13443 819 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 FAM26FQ5R3K3 315 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 OTUD7BQ6GQQ9 843 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 EFCAB13Q8IY85 973 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 FNBP4Q8N3X1 1017 aaPredicted RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 LRRC8CQ8TDW0 803 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 USP44Q9H0E7 712 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 PTH1RQ03431 593 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SLMAPQ14BN4 828 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 EXOC3L4Q17RC7 722 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 FAM178BQ8IXR5 827 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 MED10Q9BTT4 135 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 WDR11Q9BZH6 1224 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 MID2Q9UJV3 735 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 XDHP47989 1333 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 A2ML1A8K2U0 1454 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 NSFP46459 744 aaKnown RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 ARHGAP4P98171 946 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 RAD51AP2Q09MP3 1159 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SCRN1Q12765 414 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 BFSP1Q12934 665 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 CUL4AQ13619 759 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 RUBCNQ92622 972 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 P2RX5Q93086 422 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 SPC25Q9HBM1 224 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 HESX1Q9UBX0 185 aa9.13□□□□□ -0.95
SPTLC3-201ENST00000399002 KRT39Q6A163 491 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 GPT2Q8TD30 523 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 WHAMMQ8TF30 809 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 CYP2J2P51589 502 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 NDUFA8P51970 172 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 RNASE9P60153 205 aaKnown RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 POLR2FP61218 127 aaKnown RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PTK2Q05397 1052 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 MIS18BP1Q6P0N0 1132 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 ARMCX5Q6P1M9 558 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 CCDC197Q8NCU1 140 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 SDCCAG3Q96C92 435 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 CCPG1Q9ULG6 757 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 DAAM1Q9Y4D1 1078 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 RCAN1P53805 252 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 CERKLQ49MI3 558 aaPredicted RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 FAM47AQ5JRC9 791 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 LARP4BQ92615 738 aaKnown RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 ANKRD36BP1Q96IX9 119 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 BPIFA3Q9BQP9 254 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 NACA2Q9H009 215 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 TMOD1P28289 359 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 MAP2K2P36507 400 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 BTDP43251 543 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 GLE1Q53GS7 698 aaKnown RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PRR16Q569H4 304 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PLA2G4DQ86XP0 818 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 KLHDC4Q8TBB5 520 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 FBXO41Q8TF61 875 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 ATP6V0A1Q93050 837 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 NT5C1BQ96P26 610 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 A6NJR5 290 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 KLRF2D3W0D1 207 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PRPF3O43395 683 aaKnown RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PRDM1O75626 825 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 OATP04181 439 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 A1BGP04217 495 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 SERPING1P05155 500 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PTPREP23469 700 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 DBN1Q16643 649 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 ARHGEF18Q6ZSZ5 1173 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 PNMA8AQ86V59 439 aaPredicted RBP9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 ZNF710Q8N1W2 664 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 FBXO18Q8NFZ0 1043 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 DRC3Q9H069 523 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 MLXIPQ9HAP2 919 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 GJA3Q9Y6H8 435 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 CAPN7Q9Y6W3 813 aa9.12□□□□□ -0.95
SPTLC3-201ENST00000399002 LONRF3Q496Y0 759 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 XKR9Q5GH70 373 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CDHR1Q96JP9 859 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 TXLNGQ9NUQ3 528 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 IGSF1Q8N6C5 1336 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 F8W8V4 182 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CCND2P30279 289 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CUL1Q13616 776 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 RPS6KA2Q15349 733 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CACTINQ8WUQ7 758 aaKnown RBP9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 MRPL47Q9HD33 250 aaKnown RBP9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 NLRC4Q9NPP4 1024 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CSADQ9Y600 493 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 CLIC4Q9Y696 253 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 UGGT1Q9NYU2 1555 aa9.11□□□□□ -0.95
SPTLC3-201ENST00000399002 TLR3O15455 904 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms