RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 UPP2O95045 317 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 GTF2IP78347 998 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 APBA1Q02410 837 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 TTC38Q5R3I4 469 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 NELFCDQ8IXH7 590 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 EPN3Q9H201 632 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 TAB2Q9NYJ8 693 aa10.24□□□□□ -0.77
CDH23-203ENST00000398788 TMEM131LA2VDJ0 1609 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 IKBKBO14920 756 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 FGAP02671 866 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 SLC1A4P43007 532 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 KRT71Q3SY84 523 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 SV2BQ7L1I2 683 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 CSGALNACT2Q8N6G5 542 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 TEKT4Q8WW24 435 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 KLHL29Q96CT2 875 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 RPGRIP1Q96KN7 1286 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 TM6SF1Q9BZW5 370 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 ADGRG1Q9Y653 693 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
CDH23-203ENST00000398788 NSMFQ6X4W1 530 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 LONP2Q86WA8 852 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 NLGN1Q8N2Q7 840 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 CCDC197Q8NCU1 140 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 COMMD10Q9Y6G5 202 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 A2ML1A8K2U0 1454 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 FSBPO95073 299 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 ADORA1P30542 326 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 CXCR5P32302 372 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 CA8P35219 290 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 DDR1Q08345 913 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 PAK2Q13177 524 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 ZNF408Q9H9D4 720 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 CD2APQ9Y5K6 639 aa10.23□□□□□ -0.77
CDH23-203ENST00000398788 BTBD18B2RXH4 712 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 COBLO75128 1261 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 CFBP00751 764 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 GOLGA8HP0CJ92 632 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 HSPD1P10809 573 aaKnown RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 GUCY2DQ02846 1103 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 KLHL7Q8IXQ5 586 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 SEPT12Q8IYM1 358 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 MSANTD4Q8NCY6 345 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 RGL1Q9NZL6 768 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 PCDHA5Q9Y5H7 936 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 OPLAHO14841 1288 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 SYF2O95926 243 aaKnown RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 CTNNA1P35221 906 aaKnown RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 EPHB4P54760 987 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 TMED1Q13445 227 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 SLMAPQ14BN4 828 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 ARL8AQ96BM9 186 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 IMPG2Q9BZV3 1241 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 SAMSN1Q9NSI8 373 aaKnown RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 PHKA1P46020 1223 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 IFNAR2P48551 515 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 BIRC3Q13489 604 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 ACCSLQ4AC99 568 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 GREM2Q9H772 168 aa10.22□□□□□ -0.77
CDH23-203ENST00000398788 DBNLQ9UJU6 430 aaKnown RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 POLR1AO95602 1720 aaPredicted RBP10.22□□□□□ -0.77
CDH23-203ENST00000398788 BICDL2A1A5D9 508 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 CCDC169A6NNP5 214 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 MYCLP12524 364 aaPredicted RBP10.21□□□□□ -0.77
CDH23-203ENST00000398788 ATL3Q6DD88 541 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 FUKQ8N0W3 1084 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 SNX29Q8TEQ0 813 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.77
CDH23-203ENST00000398788 RNPC3Q96LT9 517 aaKnown RBP10.21□□□□□ -0.77
CDH23-203ENST00000398788 LRWD1Q9UFC0 647 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 GGT7Q9UJ14 662 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 H0Y3Z8 333 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 PDE6AP16499 860 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 IFI16Q16666 785 aaKnown RBP10.21□□□□□ -0.77
CDH23-203ENST00000398788 ZNF354CQ86Y25 554 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 MYO1AQ9UBC5 1043 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
CDH23-203ENST00000398788 GMNCA6NCL1 334 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 HNRNPCP07910 306 aaKnown RBP eCLIP10.21□□□□□ -0.78
CDH23-203ENST00000398788 SCNN1DP51172 638 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 PTPROQ16827 1216 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 MFSD14BQ5SR56 506 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 USPL1Q5W0Q7 1092 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 GSTA5Q7RTV2 222 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 ZNF654Q8IZM8 581 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 TRIM31Q9BZY9 425 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 NLRC4Q9NPP4 1024 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 A1CFQ9NQ94 594 aaKnown RBP10.21□□□□□ -0.78
CDH23-203ENST00000398788 SERTAD1Q9UHV2 236 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 RAB21Q9UL25 225 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 IKBKGQ9Y6K9 419 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 SNAP23O00161 211 aa10.21□□□□□ -0.78
CDH23-203ENST00000398788 CTNND1O60716 968 aaKnown RBP10.21□□□□□ -0.78
CDH23-203ENST00000398788 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms