RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TRIM17Q9Y577 477 aa7.32□□□□□ -1.24
TM9SF4-202ENST00000398022 A6NCN8 305 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 LRRC10BA6NIK2 292 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 LARGE1O95461 756 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 ELF1P32519 619 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 CTHP32929 405 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 RANBP1P43487 201 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 SMC1AQ14683 1233 aaKnown RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 NECTIN1Q15223 517 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TAF1CQ15572 869 aaPredicted RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 KSR2Q6VAB6 950 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 SYT10Q6XYQ8 523 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TEX9Q8N6V9 391 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 PPHLN1Q8NEY8 458 aaKnown RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 RSAD2Q8WXG1 361 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 AKT1S1Q96B36 256 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 SKA1Q96BD8 255 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 BRD8Q9H0E9 1235 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 POM121CA8CG34 1229 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 INMTO95050 263 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TNNI2P48788 182 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 CAMK4Q16566 473 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 GALNT17Q6IS24 598 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 ARHGAP27Q6ZUM4 889 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 PACS2Q86VP3 889 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 C17orf53Q8N3J3 647 aaPredicted RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 LINC00469Q8N7U9 141 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 FAM81AQ8TBF8 368 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 MAP4K1Q92918 833 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 DACT1Q9NYF0 836 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF69Q9UC07 566 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 MAP3K2Q9Y2U5 619 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TUBA1BP68363 451 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 SHROOM1Q2M3G4 852 aaPredicted RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 ADCK5Q3MIX3 580 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 AKAP4Q5JQC9 854 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 GIGYF2Q6Y7W6 1299 aaKnown RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TUBA1AQ71U36 451 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 BTN2A1Q7KYR7 527 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 TTC6Q86TZ1 520 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 USHBP1Q8N6Y0 703 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 B4GALNT2Q8NHY0 566 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 RABEP2Q9H5N1 569 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 LRRC4BQ9NT99 713 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 SCN11AQ9UI33 1791 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 ARFGEF2Q9Y6D5 1785 aa7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 MYH14Q7Z406 1995 aaKnown RBP7.31□□□□□ -1.24
TM9SF4-202ENST00000398022 PLEKHG2Q9H7P9 1386 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 WDR90Q96KV7 1748 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 KCNQ2O43526 872 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 NEMFO60524 1076 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 RTN3O95197 1032 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 STAMBPO95630 424 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CD9P21926 228 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 IKQ13123 557 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 NMIQ13287 307 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 LAMB3Q13751 1172 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 SF3B3Q15393 1217 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ZRSR1Q15695 479 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ANO6Q4KMQ2 910 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ALFQ53S48 1182 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 EMC10Q5UCC4 262 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CAPRIN2Q6IMN6 1127 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 RASSF3Q86WH2 238 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 SLAIN1Q8ND83 568 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ANKRD7Q92527 254 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CLMNQ96JQ2 1002 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 MOGAT1Q96PD6 335 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 PGAP2Q9UHJ9 254 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 DDX41Q9UJV9 622 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ITGB1BP2Q9UKP3 347 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CEP131Q9UPN4 1083 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 RPS6KB1P23443 525 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 SKIV2L2P42285 1042 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 ZNF165P49910 485 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 GPS2Q13227 327 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 NEDD9Q14511 834 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 PPP1R18Q6NYC8 613 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 SMYD1Q8NB12 490 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 MSANTD4Q8NCY6 345 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 LINS1Q8NG48 757 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CTNNBL1Q8WYA6 563 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 IP6K1Q92551 441 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 E2F7Q96AV8 911 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CEP95Q96GE4 821 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 BCL2L12Q9HB09 334 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 PIH1D1Q9NWS0 290 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 MAGED1Q9Y5V3 778 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CEMIPQ8WUJ3 1361 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 BECN2A8MW95 431 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 BHMG1C9JSJ3 638 aaPredicted RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 GRM8O00222 908 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 SART1O43290 800 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 PTGS1P23219 599 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 MXI1P50539 228 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 AP2B1P63010 937 aa7.3□□□□□ -1.24
TM9SF4-202ENST00000398022 CATSPER4Q7RTX7 472 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms