RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SNAPC2Q13487 334 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 SAMD3Q8N6K7 520 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 ZNF579Q8NAF0 562 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 CLEC4DQ8WXI8 215 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 FERMT2Q96AC1 680 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 ANO3Q9BYT9 981 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 RAVER2Q9HCJ3 691 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 LCTP09848 1927 aa22.19■■□□□ 1.14
PDLIM2-205ENST00000397761 FAM237AA0A1B0GTK4 181 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 LIG1P18858 919 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 CMA1P23946 247 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 HSD17B4P51659 736 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 ARL6IP4Q66PJ3 421 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 GADL1Q6ZQY3 521 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 MAP3K20Q9NYL2 800 aaKnown RBP22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 TMEM63CQ9P1W3 806 aa22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.18■■□□□ 1.14
PDLIM2-205ENST00000397761 LAD1O00515 517 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 MCM7P33993 719 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 GPAT2Q6NUI2 795 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 CAVIN1Q6NZI2 390 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 CCAR1Q8IX12 1150 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 CPXCR1Q8N123 301 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 ENGASEQ8NFI3 743 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 MRPS27Q92552 414 aaKnown RBP22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 MAF1Q9H063 256 aa22.17■■□□□ 1.14
PDLIM2-205ENST00000397761 GCOM1H8Y6P7 765 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 POLR2MP0CAP2 368 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 ZBTB48P10074 688 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 SREBF1P36956 1147 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 USP11P51784 963 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 TMEM132BQ14DG7 1078 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 PPP4R3AQ6IN85 833 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 POTEEQ6S8J3 1075 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 MB21D1Q8N884 522 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 TBC1D5Q92609 795 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 MS4A4AQ96JQ5 239 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 GOLPH3LQ9H4A5 285 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 CTDP1Q9Y5B0 961 aaPredicted RBP22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 MRVI1Q9Y6F6 885 aa22.16■■□□□ 1.14
PDLIM2-205ENST00000397761 GCFC2P16383 781 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 PRPHP41219 470 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 PABPC4Q13310 644 aaKnown RBP eCLIP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 LETM2Q2VYF4 491 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 RESP18Q5W5W9 173 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SHC4Q6S5L8 630 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 MOXD1Q6UVY6 613 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 MCF2L2Q86YR7 1114 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 FSIP1Q8NA03 581 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SYAP1Q96A49 352 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 MBOAT7Q96N66 472 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 NAP1L4Q99733 375 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 TEX13BQ9BXU2 312 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 CYP3A7-CYP3A51PA0A087WV96 503 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SPDYE3A6NKU9 549 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 CFBP00751 764 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 ALAS1P13196 640 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 CYP3A7P24462 503 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 HOXA13P31271 388 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 APLP1P51693 650 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 GTF2A2P52657 109 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 FAM160A1Q05DH4 1040 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SNW1Q13573 536 aaKnown RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 TKFCQ3LXA3 575 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SPRYD7Q5W111 196 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 CLIC6Q96NY7 704 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 ASCC2Q9H1I8 757 aaPredicted RBP22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 HPSEQ9Y251 543 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 SLC45A1Q9Y2W3 748 aa22.15■■□□□ 1.14
PDLIM2-205ENST00000397761 ZNFX1Q9P2E3 1918 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 NFIBO00712 420 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 CCNT1O60563 726 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 CYP3A4P08684 503 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 CETPP11597 493 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 GRIN1Q05586 938 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 MUM1L1Q5H9M0 696 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 SNRNP48Q6IEG0 339 aaKnown RBP22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 TMEM60Q9H2L4 133 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 RIPK3Q9Y572 518 aa22.14■■□□□ 1.13
PDLIM2-205ENST00000397761 NR1I2O75469 434 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 CIITAP33076 1130 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 IRX3P78415 501 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 ARHGAP4P98171 946 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 CCDC73Q6ZRK6 1079 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 FMR1NBQ8N0W7 255 aaPredicted RBP22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 TRERF1Q96PN7 1200 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 DDX19AQ9NUU7 478 aaKnown RBP22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 DACT1Q9NYF0 836 aa22.13■■□□□ 1.13
PDLIM2-205ENST00000397761 NEMFO60524 1076 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 TDP2O95551 362 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 STAT3P40763 770 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 HERVK_113P62684 666 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 IL17AQ16552 155 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 TPRNQ4KMQ1 711 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 CCDC183Q5T5S1 534 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 MTMR9Q96QG7 549 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 RNF146Q9NTX7 359 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 FRMPD4Q14CM0 1322 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 RPTORQ8N122 1335 aa22.12■■□□□ 1.13
PDLIM2-205ENST00000397761 A0A1B0GVL5 298 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms