RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 NLRP12P59046 1061 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 TFDP1Q14186 410 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 ZNF827Q17R98 1081 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 SESTD1Q86VW0 696 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 CCDC127Q96BQ5 260 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 STXBP2Q15833 593 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 POTEAQ6S8J7 498 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 ABI1Q8IZP0 508 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 CD2BP2O95400 341 aaKnown RBP17.06■□□□□ 0.32
LSS-202ENST00000397728 CCDC84Q86UT8 332 aaPredicted RBP17.06■□□□□ 0.32
LSS-202ENST00000397728 CNGA4Q8IV77 575 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 NOX5Q96PH1 765 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 NACA2Q9H009 215 aa17.06■□□□□ 0.32
LSS-202ENST00000397728 HNRNPDLO14979 420 aaKnown RBP17.05■□□□□ 0.32
LSS-202ENST00000397728 HOXD10P28358 340 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 LRMPQ12912 555 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 RNF34Q969K3 372 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 GJA10Q969M2 543 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 CHAMP1Q96JM3 812 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 KRT86O43790 486 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 CCDC175P0C221 793 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 PRPHP41219 470 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 SLC39A14Q15043 492 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 QRICH1Q2TAL8 776 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 ARMCX5Q6P1M9 558 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
LSS-202ENST00000397728 RBM46Q8TBY0 533 aaKnown RBP17.05■□□□□ 0.32
LSS-202ENST00000397728 PPP1R16BQ96T49 567 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 CCDC113Q9H0I3 377 aa17.05■□□□□ 0.32
LSS-202ENST00000397728 GOLGA6L10A0A0M3HER8 536 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
LSS-202ENST00000397728 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
LSS-202ENST00000397728 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
LSS-202ENST00000397728 GJB4Q9NTQ9 266 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 FCER1AP12319 257 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 CXCL9Q07325 125 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 DDR1Q08345 913 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 NACC1Q96RE7 527 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 GUCA1BQ9UMX6 200 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 ORC4O43929 436 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
LSS-202ENST00000397728 TXNRD3Q86VQ6 643 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 GOLGA1Q92805 767 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 PCDHA6Q9UN73 950 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 PCDHA8Q9Y5H6 950 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 MB21D2Q8IYB1 491 aaPredicted RBP17.04■□□□□ 0.32
LSS-202ENST00000397728 ZNF280CQ8ND82 737 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 RFX7Q2KHR2 1363 aa17.04■□□□□ 0.32
LSS-202ENST00000397728 EIF3JO75822 258 aaKnown RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 POMGNT1Q8WZA1 660 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 CCDC97Q96F63 343 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 EEF2KMTQ96G04 330 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 RPS6KC1Q96S38 1066 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 RNF216Q9NWF9 866 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 PSAPP07602 524 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 XRCC5P13010 732 aaKnown RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 ARHGAP44Q17R89 818 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 ACAD9Q9H845 621 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 COMMD10Q9Y6G5 202 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 DDNO94850 711 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 COG2Q14746 738 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 KRBA2Q6ZNG9 492 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 C3orf67Q6ZVT6 689 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 CCDC102AQ96A19 550 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 SLC4A9Q96Q91 983 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 FTOQ9C0B1 505 aaKnown RBP eCLIP17.03■□□□□ 0.326e-10■□□□□ 9.5
LSS-202ENST00000397728 FHDC1Q9C0D6 1143 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 LY9Q9HBG7 655 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 LRRC4BQ9NT99 713 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 KIAA1468Q9P260 1216 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 FANCCQ00597 558 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 SNAPC2Q13487 334 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 ZNF512BQ96KM6 892 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 PRMT6Q96LA8 375 aaPredicted RBP17.03■□□□□ 0.32
LSS-202ENST00000397728 LZTFL1Q9NQ48 299 aa17.03■□□□□ 0.32
LSS-202ENST00000397728 AKR1B15C9JRZ8 316 aaPredicted RBP17.02■□□□□ 0.32
LSS-202ENST00000397728 GTPBP6O43824 516 aaPredicted RBP17.02■□□□□ 0.32
LSS-202ENST00000397728 NDUFA8P51970 172 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 MTMR1Q13613 665 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 MMP19Q99542 508 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 MYL3P08590 195 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 TMEM191BP0C7N4 346 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 IFFO1Q0D2I5 559 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 ADGRF4Q8IZF3 695 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.02■□□□□ 0.32
LSS-202ENST00000397728 NLRP7Q8WX94 980 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 AK8Q96MA6 479 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 MMS19Q96T76 1030 aa17.02■□□□□ 0.32
LSS-202ENST00000397728 LMBRD1Q9NUN5 540 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms